Abstract: Bioinformatics and computational biology involve
the use of techniques including applied mathematics,
informatics, statistics, computer science, artificial intelligence,
chemistry, and biochemistry to solve biological problems
usually on the molecular level. Research in computational
biology often overlaps with systems biology. Major research
efforts in the field include sequence alignment, gene finding,
genome assembly, protein structure alignment, protein structure
prediction, prediction of gene expression and proteinprotein
interactions, and the modeling of evolution. Various
global rearrangements of permutations, such as reversals and
transpositions,have recently become of interest because of their
applications in computational molecular biology. A reversal is
an operation that reverses the order of a substring of a permutation.
A transposition is an operation that swaps two adjacent
substrings of a permutation. The problem of determining the
smallest number of reversals required to transform a given
permutation into the identity permutation is called sorting by
reversals. Similar problems can be defined for transpositions
and other global rearrangements. In this work we perform a
study about some genome rearrangement primitives. We show
how a genome is modelled by a permutation, introduce some
of the existing primitives and the lower and upper bounds
on them. We then provide a comparison of the introduced
primitives.
Abstract: During recent years wind turbine technology has
undergone rapid developments. Growth in size and the optimization
of wind turbines has enabled wind energy to become increasingly
competitive with conventional energy sources. As a result today-s
wind turbines participate actively in the power production of several
countries around the world. These developments raise a number of
challenges to be dealt with now and in the future. The penetration of
wind energy in the grid raises questions about the compatibility of the
wind turbine power production with the grid. In particular, the
contribution to grid stability, power quality and behavior during fault
situations plays therefore as important a role as the reliability. In the
present work, we addressed two fault situations that have shown their
influence on the generator and the behavior of the wind over the
defects which are briefly discussed based on simulation results.
Abstract: In this study, the contact problem of a layered composite which consists of two materials with different elastic constants and heights resting on two rigid flat supports with sharp edges is considered. The effect of gravity is neglected. While friction between the layers is taken into account, it is assumed that there is no friction between the supports and the layered composite so that only compressive tractions can be transmitted across the interface. The layered composite is subjected to a uniform clamping pressure over a finite portion of its top surface. The problem is reduced to a singular integral equation in which the contact pressure is the unknown function. The singular integral equation is evaluated numerically and the results for various dimensionless quantities are presented in graphical forms.
Abstract: A generalized Digital Modulation Identification algorithm for adaptive demodulator has been developed and presented in this paper. The algorithm developed is verified using wavelet Transform and histogram computation to identify QPSK and QAM with GMSK and M–ary FSK modulations. It has been found that the histogram peaks simplifies the procedure for identification. The simulated results show that the correct modulation identification is possible to a lower bound of 5 dB and 12 dB for GMSK and QPSK respectively. When SNR is above 5 dB the throughput of the proposed algorithm is more than 97.8%. The receiver operating characteristics (ROC) has been computed to measure the performance of the proposed algorithm and the analysis shows that the probability of detection (Pd) drops rapidly when SNR is 5 dB and probability of false alarm (Pf) is smaller than 0.3. The performance of the proposed algorithm has been compared with existing methods and found it will identify all digital modulation schemes with low SNR.
Abstract: In this paper, all-optical signal processors that perform
both microwave mixing and bandpass filtering in a radio-over-fiber
(RoF) link are presented. The key device is a Mach-Zehnder
modulator (MZM) which performs all-optical microwave mixing. An
up-converted microwave signal is obtained and other unwanted
frequency components are suppressed at the end of the fiber span.
Abstract: An integrated Artificial Neural Network- Particle Swarm Optimization (PSO) is presented for analyzing global electricity consumption. To aim this purpose, following steps are done: STEP 1: in the first step, PSO is applied in order to determine world-s oil, natural gas, coal and primary energy demand equations based on socio-economic indicators. World-s population, Gross domestic product (GDP), oil trade movement and natural gas trade movement are used as socio-economic indicators in this study. For each socio-economic indicator, a feed-forward back propagation artificial neural network is trained and projected for future time domain. STEP 2: in the second step, global electricity consumption is projected based on the oil, natural gas, coal and primary energy consumption using PSO. global electricity consumption is forecasted up to year 2040.
Abstract: Isobaric vapor-liquid equilibrium measurements are
reported for the binary mixture of Methyl acetate and
Isopropylbenzene at 97.3 kPa. The measurements have been
performed using a vapor recirculating type (modified Othmer's)
equilibrium still. The mixture shows positive deviation from ideality
and does not form an azeotrope. The activity coefficients have been
calculated taking into consideration the vapor phase nonideality. The
data satisfy the thermodynamic consistency tests of Herington and
Black. The activity coefficients have been satisfactorily correlated by
means of the Margules, NRTL, and Black equations. A comparison
of the values of activity coefficients obtained by experimental data
with the UNIFAC model has been made.
Abstract: The article investigates how 14- to 15- year-olds build informal conceptions of inferential statistics as they engage in a modelling process and build their own computer simulations with dynamic statistical software. This study proposes four primary phases of informal inferential reasoning for the students in the statistical modeling and simulation process. Findings show shifts in the conceptual structures across the four phases and point to the potential of all of these phases for fostering the development of students- robust knowledge of the logic of inference when using computer based simulations to model and investigate statistical questions.
Abstract: The main goal of this paper is to establish a
methodology for testing and optimizing GPRS performance over
Libya GSM network as well as to propose a suitable optimization
technique to improve performance. Some measurements of
download, upload, throughput, round-trip time, reliability, handover,
security enhancement and packet loss over a GPRS access network
were carried out. Measured values are compared to the theoretical
values that could be calculated beforehand. This data should be
processed and delivered by the server across the wireless network to
the client. The client on the fly takes those pieces of the data and
process immediately. Also, we illustrate the results by describing the
main parameters that affect the quality of service. Finally, Libya-s
two mobile operators, Libyana Mobile Phone and Al-Madar al-
Jadeed Company are selected as a case study to validate our
methodology.
Abstract: The paper proposes the novel design of a 3T XOR gate combining complementary CMOS with pass transistor logic. The design has been compared with earlier proposed 4T and 6T XOR gates and a significant improvement in silicon area and power-delay product has been obtained. An eight transistor full adder has been designed using the proposed three-transistor XOR gate and its performance has been investigated using 0.15um and 0.35um technologies. Compared to the earlier designed 10 transistor full adder, the proposed adder shows a significant improvement in silicon area and power delay product. The whole simulation has been carried out using HSPICE.
Abstract: Positron emission particle tracking (PEPT) is a
technique in which a single radioactive tracer particle can be
accurately tracked as it moves. A limitation of PET is that in order to
reconstruct a tomographic image it is necessary to acquire a large
volume of data (millions of events), so it is difficult to study rapidly
changing systems. By considering this fact, PEPT is a very fast
process compared with PET.
In PEPT detecting both photons defines a line and the annihilation
is assumed to have occurred somewhere along this line. The location
of the tracer can be determined to within a few mm from coincident
detection of a small number of pairs of back-to-back gamma rays and
using triangulation. This can be achieved many times per second and
the track of a moving particle can be reliably followed. This
technique was invented at the University of Birmingham [1].
The attempt in PEPT is not to form an image of the tracer particle
but simply to determine its location with time. If this tracer is
followed for a long enough period within a closed, circulating system
it explores all possible types of motion.
The application of PEPT to industrial process systems carried out
at the University of Birmingham is categorized in two subjects: the
behaviour of granular materials and viscous fluids. Granular
materials are processed in industry for example in the manufacture of
pharmaceuticals, ceramics, food, polymers and PEPT has been used
in a number of ways to study the behaviour of these systems [2].
PEPT allows the possibility of tracking a single particle within the
bed [3]. Also PEPT has been used for studying systems such as: fluid
flow, viscous fluids in mixers [4], using a neutrally-buoyant tracer
particle [5].
Abstract: Social, culture and artistic status of a society in
various historical eras is affected by numerous, and sometimes
imposed, factors that better understanding requires analysis of such
conditions. Throughout history Iran has been involved with
determining and significant events that examining each of these
events can improve the understanding of social conditions of this
country in the intended time. Mongolian conquest of Iran is one of
most significant events in the history of Iran with consequences that
never left Iranian societies. During this tragic invasion and
subsequent devastating wars, which led to establishment of Ilkhanate
dynasty, numerous cultural and artistic changes occurred both in
Mongolian conquerors and Iranian society. This study examines these
changes with a glimpse towards art and architecture as important part
of cultural aspects and social communication.
Abstract: The fuzzy technique is an operator introduced in order
to simulate at a mathematical level the compensatory behavior in
process of decision making or subjective evaluation. The following
paper introduces such operators on hand of computer vision
application.
In this paper a novel method based on fuzzy logic reasoning
strategy is proposed for edge detection in digital images without
determining the threshold value. The proposed approach begins by
segmenting the images into regions using floating 3x3 binary matrix.
The edge pixels are mapped to a range of values distinct from each
other. The robustness of the proposed method results for different
captured images are compared to those obtained with the linear Sobel
operator. It is gave a permanent effect in the lines smoothness and
straightness for the straight lines and good roundness for the curved
lines. In the same time the corners get sharper and can be defined
easily.
Abstract: This article describes design of the 8-bit asynchronous
microcontroller simulation model in VHDL. The model is created in
ISE Foundation design tool and simulated in Modelsim tool. This
model is a simple application example of asynchronous systems
designed in synchronous design tools. The design process of creating
asynchronous system with 4-phase bundled-data protocol and with
matching delays is described in the article. The model is described in
gate-level abstraction.
The simulation waveform of the functional construction is the
result of this article. Described construction covers only the
simulation model. The next step would be creating synthesizable
model to FPGA.
Abstract: The aim of this paper is to emphasize and alleviate the effect of phase noise due to imperfect local oscillators on the performances of a Multi-Carrier CDMA system. After the cancellation of Common Phase Error (CPE), an iterative approach is introduced which iteratively estimates Inter-Carrier Interference (ICI) components in the frequency domain and cancels their contribution in the time domain. Simulation are conducted in order to investigate the achievable performances for several parameters, such as the spreading factor, the modulation order, the phase noise power and the transmission Signal-to-Noise Ratio.
Abstract: Purpose of this work is to develop an automatic classification system that could be useful for radiologists in the breast cancer investigation. The software has been designed in the framework of the MAGIC-5 collaboration. In an automatic classification system the suspicious regions with high probability to include a lesion are extracted from the image as regions of interest (ROIs). Each ROI is characterized by some features based generally on morphological lesion differences. A study in the space features representation is made and some classifiers are tested to distinguish the pathological regions from the healthy ones. The results provided in terms of sensitivity and specificity will be presented through the ROC (Receiver Operating Characteristic) curves. In particular the best performances are obtained with the Neural Networks in comparison with the K-Nearest Neighbours and the Support Vector Machine: The Radial Basis Function supply the best results with 0.89 ± 0.01 of area under ROC curve but similar results are obtained with the Probabilistic Neural Network and a Multi Layer Perceptron.
Abstract: Traffic density, an indicator of traffic
conditions, is one of the most critical characteristics to
Intelligent Transport Systems (ITS). This paper investigates
recursive traffic density estimation using the information
provided from inductive loop detectors. On the basis of the
phenomenological relationship between speed and density, the
existing studies incorporate a state space model and update the
density estimate using vehicular speed observations via the
extended Kalman filter, where an approximation is made
because of the linearization of the nonlinear observation
equation. In practice, this may lead to substantial estimation
errors. This paper incorporates a suitable transformation to
deal with the nonlinear observation equation so that the
approximation is avoided when using Kalman filter to
estimate the traffic density. A numerical study is conducted. It
is shown that the developed method outperforms the existing
methods for traffic density estimation.
Abstract: An electronic portal image device (EPID) has become
a method of patient-specific IMRT dose verification for radiotherapy.
Research studies have focused on pre and post-treatment verification,
however, there are currently no interventional procedures using EPID
dosimetry that measure the dose in real time as a mechanism to
ensure that overdoses do not occur and underdoses are detected as
soon as is practically possible. As a result, an EPID-based real time
dose verification system for dynamic IMRT was developed and was
implemented with MATLAB/Simulink. The EPID image acquisition
was set to continuous acquisition mode at 1.4 images per second. The
system defined the time constraint gap, or execution gap at the image
acquisition time, so that every calculation must be completed before
the next image capture is completed. In addition, the
Abstract: The last years have seen an increasing use of image analysis techniques in the field of biomedical imaging, in particular in microscopic imaging. The basic step for most of the image analysis techniques relies on a background image free of objects of interest, whether they are cells or histological samples, to perform further analysis, such as segmentation or mosaicing. Commonly, this image consists of an empty field acquired in advance. However, many times achieving an empty field could not be feasible. Or else, this could be different from the background region of the sample really being studied, because of the interaction with the organic matter. At last, it could be expensive, for instance in case of live cell analyses. We propose a non parametric and general purpose approach where the background is built automatically stemming from a sequence of images containing even objects of interest. The amount of area, in each image, free of objects just affects the overall speed to obtain the background. Experiments with different kinds of microscopic images prove the effectiveness of our approach.
Abstract: In this paper, we propose a novel concept of relative
distance measurement using Stereo Vision Technology and discuss
its implementation on a FPGA based real-time image processor. We
capture two images using two CCD cameras and compare them.
Disparity is calculated for each pixel using a real time dense disparity
calculation algorithm. This algorithm is based on the concept of
indexed histogram for matching. Disparity being inversely
proportional to distance (Proved Later), we can thus get the relative
distances of objects in front of the camera. The output is displayed on
a TV screen in the form of a depth image (optionally using pseudo
colors). This system works in real time on a full PAL frame rate (720
x 576 active pixels @ 25 fps).