Abstract: Approximate tandem repeats in a genomic sequence are
two or more contiguous, similar copies of a pattern of nucleotides.
They are used in DNA mapping, studying molecular evolution
mechanisms, forensic analysis and research in diagnosis of inherited
diseases. All their functions are still investigated and not well
defined, but increasing biological databases together with tools for
identification of these repeats may lead to discovery of their specific
role or correlation with particular features. This paper presents a new
approach for finding approximate tandem repeats in a given sequence,
where the similarity between consecutive repeats is measured using
the Hamming distance. It is an enhancement of a method for finding
exact tandem repeats in DNA sequences based on the Burrows-
Wheeler transform.
Abstract: The purpose of this paper is to show efficiency and capability LZWµ in data compression. The LZWµ technique is enhancement from existing LZW technique. The modification the existing LZW is needed to produce LZWµ technique. LZW read one by one character at one time. Differ with LZWµ technique, where the LZWµ read three characters at one time. This paper focuses on data compression and tested efficiency and capability LZWµ by different data format such as doc type, pdf type and text type. Several experiments have been done by different types of data format. The results shows LZWµ technique is better compared to existing LZW technique in term of file size.
Abstract: In this work Membrane Distillation is applied to
concentrate orange Juice. Clarified orange juice (11o Brix) obtained
from fresh fruits and a sugar solution was subjected to membrane
distillation. The experiments were performed on a flat sheet module
using orange juice and sucrose solution as feeds. The concentration
of a sucrose solution, used as a model fruit juice and also orange
juice, was carried out in a direct contact membrane distillation using
hydrophobic PTFE membrane of pore size 0.2 μm and porosity 70%.
Surface modification of PTFE membrane has been carried out by
treating membrane with alcohol and water solution to make it
hydrophilic and then hydrophobicity was regained by drying. The
influences of the feed temperature, feed concentration, flow rate,
operating time on the permeate flux were studied for treated and non
treated membrane. In this work treated and non treated membrane
were compared in terms of water flux, Within the tested range, MD
with surface modified membrane the water flux has been
significantly improved by treating the membrane surface.
Abstract: The effect of Alumina nanoparticle size on thermophysical
properties, heat transfer performance and pressure loss characteristics of
Aviation Turbine Fuel (ATF)-Al2O3 nanofluids is studied experimentally for
the proposed application of regenerative cooling of semi-cryogenic rocket
engine thrust chambers. Al2O3 particles with mean diameters of 50 nm or 150
nm are dispersed in ATF. At 500C and 0.3% particle volume concentration,
the bigger particles show increases of 17% in thermal conductivity and 55% in
viscosity, whereas the smaller particles show corresponding increases of 21%
and 22% for thermal conductivity and viscosity respectively. Contrary to these
results, experiments to study the heat transfer performance and pressure loss
characteristics show that at the same pumping power, the maximum
enhancement in heat transfer coefficient at 500C and 0.3% concentration is
approximately 47% using bigger particles, whereas it is only 36% using
smaller particles.
Abstract: In this paper, 3X3 routing nodes are proposed to
provide speedup and parallel processing capability in Data Vortex
network architectures. The new design not only significantly
improves network throughput and latency, but also eliminates the
need for distributive traffic control mechanism originally embedded
among nodes and the need for nodal buffering. The cost effectiveness
is studied by a comparison study with the previously proposed 2-
input buffered networks, and considerable performance enhancement
can be achieved with similar or lower cost of hardware. Unlike
previous implementation, the network leaves small probability of
contention, therefore, the packet drop rate must be kept low for such
implementation to be feasible and attractive, and it can be achieved
with proper choice of operation conditions.
Abstract: Microbubbbles incorporating ultrasound have been used to increase the efficacy of targeted drug delivery, because microstreaming induced by cavitating bubbles affects the drug perfusion into the target cells and tissues. In order to clarify the physical effects of microstreaming on drug perfusion into tissues, a preliminary experimental study of perfusion enhancement by a stably oscillating microbubble was performed. Microstreaming was induced by an oscillating bubble at 15 kHz, and perfusion of dye into an agar phantom was optically measured by histology on agar phantom. Surface color intensity and the penetration length of dye in the agar phantom were increased more than 70% and 30%, respectively, due to the microstreaming induced by an oscillating bubble. The mass of dye perfused into a tissue phantom for 30 s was increased about 80% in the phantom with an oscillating bubble. This preliminary experiment shows the physical effects of steady streaming by an oscillating bubble can enhance the drug perfusion into the tissues while minimizing the biological effects.
Abstract: This paper describes the performance of TCP Vegas
over the wireless IPv6 network. The performance of TCP Vegas is
evaluated using network simulator (ns-2). The simulation experiment
investigates how packet spacing affects the network delay, network
throughput and network efficiency of TCP Vegas. Moreover, we
investigate how the variable FTP packet sizes affect the network
performance. The result of the simulation experiment shows that as
the packet spacing is implements, the network delay is reduces,
network throughput and network efficiency is optimizes. As the FTP
packet sizes increase, the ratio of delay per throughput decreases.
From the result of experiment, we propose the appropriate packet size
in transmitting file transfer protocol application using TCP Vegas
with packet spacing enhancement over wireless IPv6 environment in
ns-2. Additionally, we suggest the appropriate ratio in determining
the appropriate RTT and buffer size in a network.
Abstract: Nigella sativa L. is an aromatic plant belonging to the
family Ranunculaceae. It has been used traditionally, especially in the
middle East and India, for the treatment of asthma, cough, bronchitis,
headache, rheumatism, fever, influenza and eczema. Several
biological activities have been reported in Nigella sativa seeds,
including antioxidant. In this context we tried to estimate the
antioxidant activity of various extracts prepared from Nigella sativa
seeds, methanolic extract (ME), chloroformic extract (CE), hexanic
extract (HE : fixed oil), ethyl acetate extract (EAE) water extract
(WE). The Folin-Ciocalteu assay showed that CE and EAE contained
high level of phenolic compounds 81.31 and 72.43μg GAE/mg of
extract respectively. Similarly, the CE and EAE exhibited the highest
DPPH radical scavenging activity, with IC50 values of 106.56μg/ml
and 121.62μg/ml respectively. In addition, CE and HE showed the
most scavenging activity against superoxide radical generated in the
PMS-NADH-NBT system with respective IC50 values of 361.86
μg/ml and 371.80 μg/ml, which is comparable to the activity of the
standard antioxidant BHT (344.59 μg/ml). Ferrous ion chelating
capacity assay showed that WE, EAE and ME are the most active
with 40.57, 39.70 and 22.02 mg EDTA-E/g of extract. The inhibition
of linoleic acid/ß-carotene coupled oxidation was estimated by ßcarotene
bleaching assay, this showed a highest relative antioxidant
activity with CE and EAE (69.82% of inhibition). The antioxidant
activities of the methanolic extract and the fixed oil are confirmed by
an in vivo assay in mice, the daily oral administration of methanolic
extract (500 and 800 mg/kg/day) and fixed oil (2 and 4 ml/kg/day)
during 21 days, resulted in a significant enhancement of the blood
total antioxidant capacity (measured by KRL test) and the plasmatic
antioxidant capacity towards DPPH radical.
Abstract: By analyzing the sources of energy and power
loss in PWM (Pulse Width Modulation) controlled drivers of
water electrolysis cells, it is possible to reduce the power
dissipation and enhance the efficiency of such hydrogen
production units. A PWM controlled power driver is based on
a semiconductor switching element where its power
dissipation might be a remarkable fraction of the total power
demand of an electrolysis system. Power dissipation in a
semiconductor switching element is related to many different
parameters which could be fitted into two main categories:
switching losses and conduction losses. Conduction losses are
directly related to the built, structure and capabilities of a
switching device itself and indeed the conditions in which the
element is handling the switching application such as voltage,
current, temperature and of course the fabrication technology.
On the other hand, switching losses have some other
influencing variables other than the mentioned such as control
system, switching method and power electronics circuitry of
the PWM power driver. By analyzings the characteristics of
recently developed power switching transistors from different
families of Bipolar Junction Transistors (BJT), Metal Oxide
Semiconductor Field Effect Transistors (MOSFET) and
Insulated Gate Bipolar Transistors (IGBT), some
recommendations are made in this paper which are able to
lead to achieve higher hydrogen production efficiency by
utilizing PWM controlled water electrolysis cells.
Abstract: This paper proposes a method for speckle reduction in
medical ultrasound imaging while preserving the edges with the
added advantages of adaptive noise filtering and speed. A nonlinear
image diffusion method that incorporates local image parameter,
namely, scatterer density in addition to gradient, to weight the
nonlinear diffusion process, is proposed. The method was tested for
the isotropic case with a contrast detail phantom and varieties of
clinical ultrasound images, and then compared to linear and some
other diffusion enhancement methods. Different diffusion parameters
were tested and tuned to best reduce speckle noise and preserve
edges. The method showed superior performance measured both
quantitatively and qualitatively when incorporating scatterer density
into the diffusivity function. The proposed filter can be used as a
preprocessing step for ultrasound image enhancement before
applying automatic segmentation, automatic volumetric calculations,
or 3D ultrasound volume rendering.
Abstract: With getting older in the whole population, the
prevalence of stroke and its residual disability is getting higher and
higher recently in Taiwan. The functional electrical stimulation
cycling system (FESCS) is useful for hemiplegic patients. Because
that the muscle of stroke patients is under hybrid activation. The raw
electromyography (EMG) represents the residual muscle force of
stroke subject whereas the peak-to-peak of stimulus EMG indicates the
force enhancement benefiting from ES. It seems that EMG signals
could be used for a parameter of feedback control mechanism. So, we
design the feedback control protocol of FESCS, it includes
physiological signal recorder, FPGA biomedical module, DAC and
electrical stimulation circuit. Using the intensity of real-time EMG
signal obtained from patients, as a feedback control method for the
output voltage of FES-cycling system.
Abstract: Particle detection in very noisy and low contrast images
is an active field of research in image processing. In this article, a
method is proposed for the efficient detection and sizing of subsurface
spherical particles, which is used for the processing of softly fused
Au nanoparticles. Transmission Electron Microscopy is used for
imaging the nanoparticles, and the proposed algorithm has been
tested with the two-dimensional projected TEM images obtained.
Results are compared with the data obtained by transmission optical
spectroscopy, as well as with conventional circular object detection
algorithms.
Abstract: To reduce the carbon dioxide emission into the
atmosphere, adsorption is believed to be one of the most attractive
methods for post-combustion treatment of flue gas. In this work,
activated carbon (AC) was modified by polyethylenimine (PEI) via
impregnation in order to enhance CO2 adsorption capacity. The
adsorbents were produced at 0.04, 0.16, 0.22, 0.25, and 0.28 wt%
PEI/AC. The adsorption was carried out at a temperature range from
30 °C to 75 °C and five different gas pressures up to 1 atm. TG-DTA,
FT-IR, UV-visible spectrometer, and BET were used to characterize
the adsorbents. Effects of PEI loading on the AC for the CO2
adsorption were investigated. Effectiveness of the adsorbents on the
CO2 adsorption including CO2 adsorption capacity and adsorption
temperature was also investigated. Adsorption capacities of CO2 were
enhanced with the increase in the amount of PEI from 0.04 to 0.22
wt% PEI before the capacities decreased onwards from0.25 wt% PEI
at 30 °C. The 0.22 wt% PEI/AC showed higher adsorption capacity
than the AC for adsorption at 50 °C to 75 °C.
Abstract: This paper attempts to establish the fact that Multi
State Network Classification is essential for performance
enhancement of Transport protocols over Satellite based Networks. A
model to classify Multi State network condition taking into
consideration both congestion and channel error is evolved. In order
to arrive at such a model an analysis of the impact of congestion and
channel error on RTT values has been carried out using ns2. The
analysis results are also reported in the paper. The inference drawn
from this analysis is used to develop a novel statistical RTT based
model for multi state network classification.
An Adaptive Multi State Proactive Transport Protocol consisting
of Proactive Slow Start, State based Error Recovery, Timeout Action
and Proactive Reduction is proposed which uses the multi state
network state classification model. This paper also confirms through
detail simulation and analysis that a prior knowledge about the
overall characteristics of the network helps in enhancing the
performance of the protocol over satellite channel which is
significantly affected due to channel noise and congestion.
The necessary augmentation of ns2 simulator is done for
simulating the multi state network classification logic. This
simulation has been used in detail evaluation of the protocol under
varied levels of congestion and channel noise. The performance
enhancement of this protocol with reference to established protocols
namely TCP SACK and Vegas has been discussed. The results as
discussed in this paper clearly reveal that the proposed protocol
always outperforms its peers and show a significant improvement in
very high error conditions as envisaged in the design of the protocol.
Abstract: Steel corrosion in concrete is considered as a main
engineering problems for many countries and lots of expenses has been paid for their repair and maintenance annually. This problem
may occur in all engineering structures whether in coastal and offshore or other areas. Hence, concrete structures should be able to
withstand corrosion factors existing in water or soil. Reinforcing
steel corrosion enhancement can be measured by use of concrete
electrical resistance; and maintaining high electric resistivity in concrete is necessary for steel corrosion prevention. Lots of studies
devoted to different aspects of the subjects worldwide. In this paper, an evaluation of the effects of W/C ratio, cementitious materials, and
percent increase in silica fume were investigated on electric resistivity of high strength concrete. To do that, sixteen mix design
with one aggregate grading was planned. Five of them had varying amount of W/C ratio and other eleven mixes was prepared with
constant W/C ratio but different amount of cementitious materials.
Silica fume and super plasticizer were used with different proportions
in all specimens. Specimens were tested after moist curing for 28 days. A total of 80 cube specimens (50 mm) were tested for concrete
electrical resistance. Results show that concrete electric resistivity can be increased with increasing amount of cementitious materials
and silica fume.
Abstract: This work presents a fusion of Log Gabor Wavelet
(LGW) and Maximum a Posteriori (MAP) estimator as a speech
enhancement tool for acoustical background noise reduction. The
probability density function (pdf) of the speech spectral amplitude is
approximated by a Generalized Laplacian Distribution (GLD).
Compared to earlier estimators the proposed method estimates the
underlying statistical model more accurately by appropriately
choosing the model parameters of GLD. Experimental results show
that the proposed estimator yields a higher improvement in
Segmental Signal-to-Noise Ratio (S-SNR) and lower Log-Spectral
Distortion (LSD) in two different noisy environments compared to
other estimators.
Abstract: Delay and Disruption Tolerant Networking is part of
the Inter Planetary Internet with primary application being Deep
Space Networks. Its Terrestrial form has interesting research
applications such as Alagappa University Delay Tolerant Water
Monitoring Network which doubles as test beds for improvising its
routing scheme. DTNs depend on node mobility to deliver packets
using a store-carry-and forward paradigm. Throwboxes are small and
inexpensive stationary devices equipped with wireless interfaces and
storage. We propose the use of Throwboxes to enhance the contact
opportunities of the nodes and hence improve the Throughput. The
enhancement is evaluated using Alunivdtnsim, a desktop simulator in
C language and the results are graphically presented.
Abstract: In Multiple Sclerosis, pathological changes in the
brain results in deviations in signal intensity on Magnetic Resonance
Images (MRI). Quantitative analysis of these changes and their
correlation with clinical finding provides important information for
diagnosis. This constitutes the objective of our work. A new approach
is developed. After the enhancement of images contrast and the brain
extraction by mathematical morphology algorithm, we proceed to the
brain segmentation. Our approach is based on building statistical
model from data itself, for normal brain MRI and including clustering
tissue type. Then we detect signal abnormalities (MS lesions) as a
rejection class containing voxels that are not explained by the built
model. We validate the method on MR images of Multiple Sclerosis
patients by comparing its results with those of human expert
segmentation.
Abstract: Results in one field necessarily give insight into the
others, and all have much potential for scientific and technological
application. The Hadamard-transform technique once been applied to
the spectrometry also has its use in the SNR Enhancement of OTDR.
In this report, a new set of code (Simplex-codes) is discussed and
where the addition gain of SNR come from is implied.
Abstract: Quantum computation using qubits made of two component Bose-Einstein condensates (BECs) is analyzed. We construct a general framework for quantum algorithms to be executed using the collective states of the BECs. The use of BECs allows for an increase of energy scales via bosonic enhancement, resulting in two qubit gate operations that can be performed at a time reduced by a factor of N, where N is the number of bosons per qubit. We illustrate the scheme by an application to Deutsch-s and Grover-s algorithms, and discuss possible experimental implementations. Decoherence effects are analyzed under both general conditions and for the experimental implementation proposed.