Abstract: De novo genome assembly is always fragmented. Assembly fragmentation is more serious using the popular next generation sequencing (NGS) data because NGS sequences are shorter than the traditional Sanger sequences. As the data throughput of NGS is high, the fragmentations in assemblies are usually not the result of missing data. On the contrary, the assembled sequences, called contigs, are often connected to more than one other contigs in a complicated manner, leading to the fragmentations. False connections in such complicated connections between contigs, named a contig graph, are inevitable because of repeats and sequencing/assembly errors. Simplifying a contig graph by removing false connections directly improves genome assembly. In this work, we have developed a tool, SIMGraph, to resolve ambiguous connections between contigs using NGS data. Applying SIMGraph to the assembly of a fungus and a fish genome, we resolved 27.6% and 60.3% ambiguous contig connections, respectively. These results can reduce the experimental efforts in resolving contig connections.
Abstract: In this paper, a mathematical model is proposed to
estimate the dropping probabilities of cellular wireless networks by
queuing handoff instead of reserving guard channels. Usually, prioritized
handling of handoff calls is done with the help of guard channel
reservation. To evaluate the proposed model, gamma inter-arrival and
general service time distributions have been considered. Prevention of
some of the attempted calls from reaching to the switching center due
to electromagnetic propagation failure or whimsical user behaviour
(missed call, prepaid balance etc.), make the inter-arrival time of
the input traffic to follow gamma distribution. The performance is
evaluated and compared with that of guard channel scheme.
Abstract: In this paper, experimental testing and numerical analysis were used to investigate the effect of tube thickness on the face bending for concrete filled hollow sections connected to other structural members using Extended Hollobolts. Six samples were tested experimentally by applying pull-out load on the bolts. These samples were designed to fail by column face bending. The main variable in all tests is the column face thickness. Finite element analyses were also performed using ABAQUS 6.11 to extend the experimental results and to quantify the effect of column face thickness. Results show that, the column face thickness has a clear impact on the connection strength and stiffness. However, the amount of improvement in the connection stiffness by changing the column face thickness from 5mm to 6.3mm seems to be higher than that when increasing it from 6.3mm to 8mm. The displacement at which the bolts start pulling-out from their holes increased with the use of thinner column face due to the high flexibility of the section. At the ultimate strength, the yielding of the column face propagated to the column corner and there was no yielding in its walls. After the ultimate resistance is reached, the propagation of the yielding was mainly in the column face with a miner yielding in the walls.
Abstract: Electrocardiogram (ECG) data compression algorithm
is needed that will reduce the amount of data to be transmitted, stored
and analyzed, but without losing the clinical information content. A
wavelet ECG data codec based on the Set Partitioning In Hierarchical
Trees (SPIHT) compression algorithm is proposed in this paper. The
SPIHT algorithm has achieved notable success in still image coding.
We modified the algorithm for the one-dimensional (1-D) case and
applied it to compression of ECG data.
By this compression method, small percent root mean square
difference (PRD) and high compression ratio with low
implementation complexity are achieved. Experiments on selected
records from the MIT-BIH arrhythmia database revealed that the
proposed codec is significantly more efficient in compression and in
computation than previously proposed ECG compression schemes.
Compression ratios of up to 48:1 for ECG signals lead to acceptable
results for visual inspection.
Abstract: In this study the effect of incorporation of recycled
glass-fibre reinforced polymer (GFRP) waste materials, obtained by
means of milling processes, on mechanical behaviour of polyester
polymer mortars was assessed. For this purpose, different contents of
recycled GFRP waste powder and fibres, with distinct size gradings,
were incorporated into polyester based mortars as sand aggregates
and filler replacements. Flexural and compressive loading capacities
were evaluated and found better than unmodified polymer mortars.
GFRP modified polyester based mortars also show a less brittle
behaviour, with retention of some loading capacity after peak load.
Obtained results highlight the high potential of recycled GFRP waste
materials as efficient and sustainable reinforcement and admixture for
polymer concrete and mortars composites, constituting an emergent
waste management solution.
Abstract: In this paper we study the rheonomic mechanical systems from the point of view of Lagrange geometry, by means of its canonical semispray. We present an example of the constraint motion of a material point, in the rheonomic case.
Abstract: In present study, two kinds of thermal power plant ashes; one the fly ash and the other waste ash are mixed with adhesive tragacanth and cement to produce new composite materials. 48 new samples are produced by varying the percentages of the fly ash, waste ash, cement and tragacanth. The new samples are subjected to some tests to find out their properties such as thermal conductivity, compressive strength, tensile strength and sucking capability of water. It is found that; the thermal conductivity decreases with increasing amount of tragacanth in the mixture. The compressive, tensile strength increases when the rate of tragacanth is up to 1%, whilst as the amount of tragacanth increases up to 1.5%, the compressive, tensile strength decreases slightly. The rate of water absorption of samples was more than 30%. From this result, it is concluded that these materials can not be used as external plaster or internal plaster material that faces to water. They can be used in internal plaster unless touching water and they can be used as cover plaster under roof and riprap material in sandwich panels. It is also found that, these materials can be cut with saw, drilled with screw and painted with any kind of paint.
Abstract: An analysis is made of the flow of an incompressible viscoelastic fluid (of small memory) over a porous plate subject to suction or blowing. It is found that velocity at a point increases with increase in the elasticity in the fluid. It is also shown that wall shear stress depends only on suction and is also independent of the material of fluids. No steady solution for velocity distribution exists when there is blowing at the plate. Temperature distribution in the boundary layer is determined and it is found that temperature at a point decreases with increase in the elasticity in the fluid.
Abstract: The intermittent nature of solar energy and the energy
requirements of buildings necessitate the storage of thermal energy.
In this paper a hybrid system of storing solar energy has been
analyzed. Adding a LHS medium to a commercial solar water heater,
the required energy for heating a small room was obtained in
addition to preparing hot water. In other words, the suggested hybrid
storage system consists of two tanks: a water tank as a SHS medium;
and a paraffin tank as a LHS medium. A computing program was
used to find the optimized time schedule of charging the storage
tanks during each day, according to the solar radiation conditions.
The results show that the use of such system can improve the
capability of energy gathering comparing to the individual water
storage tank during the cold months of the year. Of course, because
of the solar radiation angles and shorten daylight in December &
January, the performance will be the same as the simple solar water
heaters (in the northern hemisphere). But the extra energy stored in
November, February, March & April, can be useful for heating a
small room for 3 hours during the cold days.
Abstract: The principal objective of a water treatment plant is to
produce water that satisfies a set of drinking water quality standards
at a reasonable price to the consumers. The gravel-bed flocculator
provide a simple and inexpensive design for flocculation in small
water treatment plants (less than 5000 m3/day capacity). The packed
bed of gravel provides ideal conditions for the formation of compact
settleable flocs because of continuous recontact provided by the
sinuous flow of water through the interstices formed by the gravel.
The field data which were obtained from the operation of the
water supply treatment unit cover the physical, chemical and
biological water qualities of the raw and settled water as obtained by
the operation of the treatment unit. The experiments were carried out
with the aim of assessing the efficiency of the gravel filter in
removing the turbidity, pathogenic bacteria, from the raw water. The
water treatment plant, which was constructed for the treatment of
river water, was in principle a rapid sand filter.
The results show that the average value of the turbidity level of
the settled water was 4.83 NTU with a standard deviation of turbidity
2.893 NTU. This indicated that the removal efficiency of the
sedimentation tank (gravel filter) was about 67.8 %. for pH values
fluctuated between 7.75 and 8.15, indicating the alkaline nature of
the raw water of the river Shatt Al-Hilla, as expected. Raw water pH
is depressed slightly following alum coagulation. The pH of the
settled water ranged from 7.75 to a maximum of 8.05.
The bacteriological tests which were carried out on the water
samples were: total coliform test, E-coli test, and the plate count test.
In each test the procedure used was as outlined in the Standard
Methods for the Examination of Water and Wastewater (APHA,
AWWA, and WPCF, 1985). The gravel filter exhibit a low
performance in removing bacterial load. The percentage bacterial
removal, which is maximum for total plate count (19%) and
minimum for total coliform (16.82%).
Abstract: A 7-step method (with 25 sub-steps) to assess risk of
air pollutants is introduced. These steps are: pre-considerations,
sampling, statistical analysis, exposure matrix and likelihood, doseresponse
matrix and likelihood, total risk evaluation, and discussion
of findings. All mentioned words and expressions are wellunderstood;
however, almost all steps have been modified, improved,
and coupled in such a way that a comprehensive method has been
prepared. Accordingly, the SADRA (Statistical Analysis-Driven Risk
Assessment) emphasizes extensive and ongoing application of
analytical statistics in traditional risk assessment models. A Sulfur
Dioxide case study validates the claim and provides a good
illustration for this method.
Abstract: Col is a classic combinatorial game played on graphs
and to solve a general instance is a PSPACE-complete problem.
However, winning strategies can be found for some specific graph
instances. In this paper, the solution of Col on complete k-ary trees
is presented.
Abstract: MABENA model is a complementary model in
comparison with traditional models such as HCMS, CMS and etc.
New factors, which have effects on preparation of strategic plans and
their sequential order in MABENA model is the platform of
presented road map in this paper.Study review shows, factors such as
emerging new critical success factors for strategic planning,
improvement of international strategic models, increasing the
maturity of companies and emerging new needs leading to design a
new model which can be responsible for new critical factors and
solve the limitations of previous strategic management models.
Preparation of strategic planning need more factors than introduced
in traditional models. The needed factors includes determining future
Critical Success Factors and competencies, defining key processes,
determining the maturity of the processes, considering all aspects of
the external environment etc. Description of aforementioned
requirements, the outcomes and their order is developing and
presenting the MABENA model-s road map in this paper. This study
presents a road map for strategic planning of the Iranian
organizations.
Abstract: This article stands in the context of rural communities
in Brazil, where, like many others emerging countries, the
overwhelming increasing markets and the overcrowded cities are
leaving behind informal settlements based on obsolete agricultural
economies and techniques. The pilot project for the community of
Goiabeira reflects the attempt to imagine a development model that
privileges the actual improvement of living conditions, the education
and training, the social inclusion and participation of the dwellers of
rural communities. Through the inclusion of operative public space,
the aim is for them to become self-sustaining, encouraging the use of
local resources for appropriate architectural, ecological and energy
technologies and devices, that are efficient, affordable and foster
community participation, in the respect of the surrounding
environment.
Abstract: Judgment is affected by many agents and distortion in this assessment is unpreventable. Personality dimensions are among those factors that interfere with the distortion. In this research, the relations between personality dimensions of subject and his judgment on friends- personality dimensions is investigated. One-hundred friend couples completed both NEO Five Factor Inventory (NEOFFI) and Ahvaz Reality Distortion Inventory (ARDI) to make judgments about themselves and their friends. Observations show that judge-s Agreement and Neuroticism dimensions are impressed by reality distortion. On the other hand, this reality distortion interferes with one-s evaluation of his friend-s Agreement, Neuroticism, and Conscientiousness dimensions. Conscientiousness with suppressive effect on judge-s other dimensions plays the irrelevant role on personality judgment. Therefore, observer-rating tools which are used as a conventional criterion seem to be not valid because of the reality distortion due to judge-s personality dimensions.
Abstract: A way of generating millimeter wave I/Q signal using inductive resonator matched poly-phase filter is suggested. Normally the poly-phase filter generates quite accurate I/Q phase and magnitude but the loss of the filter is considerable due to series connection of passive RC components. This loss term directly increases system noise figure when the poly-phase filter is used in RF Front-end. The proposed matching method eliminates above mentioned loss and in addition provides gain on the passive filter. The working algorithm is illustrated by mathematical analysis. The generated I/Q signal is used in implementing millimeter wave phase shifter for the 60 GHz communication system to verify its effectiveness. The circuit is fabricated in 90 nm TSMC RF CMOS process under 1.2 V supply voltage. The measurement results showed that the suggested method improved gain by 6.5 dB and noise by 2.3 dB. The summary of the proposed I/Q generation is compared with previous works.
Abstract: As the world move to the accomplishment of Performance Based Engineering philosophies in seismic design of Civil Engineering structures, new seismic design provisions require Structural Engineers to perform both static and dynamic analysis for the design of structures. While Linear Equivalent Static Analysis is performed for regular buildings up to 90m height in zone I and II, Dynamic Analysis should be performed for regular and irregular buildings in zone IV and V. Dynamic Analysis can take the form of a dynamic Time History Analysis or a linear Response Spectrum Analysis. In present study, Multi-storey irregular buildings with 20 stories have been modeled using software packages ETABS and SAP 2000 v.15 for seismic zone V in India. This paper also deals with the effect of the variation of the building height on the structural response of the shear wall building. Dynamic responses of building under actual earthquakes, EL-CENTRO 1949 and CHI-CHI Taiwan 1999 have been investigated. This paper highlights the accuracy and exactness of Time History analysis in comparison with the most commonly adopted Response Spectrum Analysis and Equivalent Static Analysis.
Abstract: Studies of vocal communication in Sooty-headed
Bulbul were carried out from January to December 2011. Vocal
recordings and behavioral observations were made in their natural
habitats at some localities of Lampang, Thailand. After editing, cuts
of high quality recordings were analyzed with the help of Avisoft-
SASLab Pro (version 4.40) software. More than one thousand
element repertoires in five groups were found within two vocal
structures. The two structures were short sounds with single element
and phrases composed of elements, the frequency ranged from 1-10
kHz. Most phrases were composed of 2 to 5 elements that were often
dissimilar in structure, however, these phrases were not as complex
as song phrases. The elements and phrases were combined to form
many patterns. The species used ten types of calls; i.e. alert, alarm,
aggressive, begging, contact, courtship, distress, exciting, flying and
invitation. Alert and contact calls were used more frequently than
other calls. Aggressive, alarm and distress calls could be used for
interspecific communication among some other bird species in the
same habitats.
Abstract: Gas turbine air inlet cooling is a useful method for
increasing output for regions where significant power demand and
highest electricity prices occur during the warm months. Inlet air
cooling increases the power output by taking advantage of the gas
turbine-s feature of higher mass flow rate when the compressor inlet
temperature decreases. Different methods are available for reducing
gas turbine inlet temperature. There are two basic systems currently
available for inlet cooling. The first and most cost-effective system is
evaporative cooling. Evaporative coolers make use of the evaporation
of water to reduce the gas turbine-s inlet air temperature. The second
system employs various ways to chill the inlet air. In this method, the
cooling medium flows through a heat exchanger located in the inlet
duct to remove heat from the inlet air. However, the evaporative
cooling is limited by wet-bulb temperature while the chilling can cool
the inlet air to temperatures that are lower than the wet bulb
temperature. In the present work, a thermodynamic model of a gas
turbine is built to calculate heat rate, power output and thermal
efficiency at different inlet air temperature conditions. Computational
results are compared with ISO conditions herein called "base-case".
Therefore, the two cooling methods are implemented and solved for
different inlet conditions (inlet temperature and relative humidity).
Evaporative cooler and absorption chiller systems results show that
when the ambient temperature is extremely high with low relative
humidity (requiring a large temperature reduction) the chiller is the
more suitable cooling solution. The net increment in the power output
as a function of the temperature decrease for each cooling method is
also obtained.
Abstract: Decomposition processes take place in landfill
generate leachates that can be categorized mainly of acetogenic and
methanogenic in nature. BOD:COD ratio computed in this study for a
landfill site over a 3 years duration revealed as a good indicator to
identify acetogenic leachate from methanogenic leachate. Correlation
relationships to predict pollutant level taking into consideration of
climatic condition are derived.