Abstract: Using Dynamic Bayesian Networks (DBN) to model genetic regulatory networks from gene expression data is one of the major paradigms for inferring the interactions among genes. Averaging a collection of models for predicting network is desired, rather than relying on a single high scoring model. In this paper, two kinds of model searching approaches are compared, which are Greedy hill-climbing Search with Restarts (GSR) and Markov Chain Monte Carlo (MCMC) methods. The GSR is preferred in many papers, but there is no such comparison study about which one is better for DBN models. Different types of experiments have been carried out to try to give a benchmark test to these approaches. Our experimental results demonstrated that on average the MCMC methods outperform the GSR in accuracy of predicted network, and having the comparable performance in time efficiency. By proposing the different variations of MCMC and employing simulated annealing strategy, the MCMC methods become more efficient and stable. Apart from comparisons between these approaches, another objective of this study is to investigate the feasibility of using DBN modeling approaches for inferring gene networks from few snapshots of high dimensional gene profiles. Through synthetic data experiments as well as systematic data experiments, the experimental results revealed how the performances of these approaches can be influenced as the target gene network varies in the network size, data size, as well as system complexity.
Abstract: All over the world, including the Middle and East
European countries, sustainable tillage and sowing technologies are
applied increasingly broadly with a view to optimising soil resources,
mitigating soil degradation processes, saving energy resources,
preserving biological diversity, etc. As a result, altered conditions of
tillage and sowing technological processes are faced inevitably. The
purpose of this study is to determine the seedbed topsoil hardness
when using a combined sowing coulter in different sustainable tillage
technologies. The research involved a combined coulter consisting
of two dissected blade discs and a shoe coulter. In order to determine
soil hardness at the seedbed area, a multipenetrometer was used. It
was found by experimental studies that in loosened soil, a combined
sowing coulter equally suppresses the furrow bottom, walls and soil
near the furrow; therefore, here, soil hardness was similar at all
researched depths and no significant differences were established. In
loosened and compacted (double-rolled) soil, the impact of a
combined coulter on the hardness of seedbed soil surface was more
considerable at a depth of 2 mm. Soil hardness at the furrow bottom
and walls to a distance of up to 26 mm was 1.1 MPa. At a depth of 10
mm, the greatest hardness was established at the furrow bottom. In
loosened and heavily compacted (rolled for 6 times) soil, at a depth
of 2 and 10 mm a combined coulter most of all compacted the furrow
bottom, which has a hardness of 1.8 MPa. At a depth of 20 mm, soil
hardness within the whole investigated area varied insignificantly and
fluctuated by around 2.0 MPa. The hardness of furrow walls and soil
near the furrow was by approximately 1.0 MPa lower than that at the
furrow bottom
Abstract: This article presents the developments of efficient
algorithms for tablet copies comparison. Image recognition has
specialized use in digital systems such as medical imaging,
computer vision, defense, communication etc. Comparison between
two images that look indistinguishable is a formidable task. Two
images taken from different sources might look identical but due to
different digitizing properties they are not. Whereas small variation
in image information such as cropping, rotation, and slight
photometric alteration are unsuitable for based matching
techniques. In this paper we introduce different matching
algorithms designed to facilitate, for art centers, identifying real
painting images from fake ones. Different vision algorithms for
local image features are implemented using MATLAB. In this
framework a Table Comparison Computer Tool “TCCT" is
designed to facilitate our research. The TCCT is a Graphical Unit
Interface (GUI) tool used to identify images by its shapes and
objects. Parameter of vision system is fully accessible to user
through this graphical unit interface. And then for matching, it
applies different description technique that can identify exact
figures of objects.
Abstract: Potato is one of the main components of warm meals in Latvia. Consumption of fried potatoes in Latvia is the highest comparing to Nordic and other Baltic countries. Therefore acrylamide (AA) intake coming from fried potatoes in population might be high as well. The aim of the research was to determine AA content in traditionally cooked potatoes bred and cultivated in Latvia. Five common Latvian potato varieties were selected: Lenora, Brasla, Imanta, Zile and Madara. A two-year research was conducted during two periods: just after harvesting and after six months of storage. The following cooking methods were used: shallow frying (150 ± 5 °C); deep-fat frying (180 ± 5 °C) and roasting (210 ± 5 °C). Time and temperature was recorded during frying. AA was extracted from potatoes by solid phase extraction and AA content was determined by LC-MS/MS. AA content significantly differs (p
Abstract: With the advance of information technology in the
new era the applications of Internet to access data resources has
steadily increased and huge amount of data have become accessible
in various forms. Obviously, the network providers and agencies,
look after to prevent electronic attacks that may be harmful or may
be related to terrorist applications. Thus, these have facilitated the
authorities to under take a variety of methods to protect the special
regions from harmful data. One of the most important approaches is
to use firewall in the network facilities. The main objectives of
firewalls are to stop the transfer of suspicious packets in several
ways. However because of its blind packet stopping, high process
power requirements and expensive prices some of the providers are
reluctant to use the firewall. In this paper we proposed a method to
find a discriminate function to distinguish between usual packets and
harmful ones by the statistical processing on the network router logs.
By discriminating these data, an administrator may take an approach
action against the user. This method is very fast and can be used
simply in adjacent with the Internet routers.
Abstract: Stream Control Transmission Protocol (SCTP) has been
proposed to provide reliable transport of real-time communications.
Due to its attractive features, such as multi-streaming and multihoming,
the SCTP is often expected to be an alternative protocol
for TCP and UDP. In the original SCTP standard, the secondary path
is mainly regarded as a redundancy. Recently, most of researches
have focused on extending the SCTP to enable a host to send its
packets to a destination over multiple paths simultaneously. In order
to transfer packets concurrently over the multiple paths, the SCTP
should be well designed to avoid unnecessary fast retransmission
and the mis-estimation of congestion window size through the paths.
Therefore, we propose an Enhanced Cooperative ACK SCTP (ECASCTP)
to improve the path recovery efficiency of multi-homed host
which is under concurrent multiple transfer mode. We evaluated the
performance of our proposed scheme using ns-2 simulation in terms
of cwnd variation, path recovery time, and goodput. Our scheme
provides better performance in lossy and path asymmetric networks.
Abstract: Perceptions of quality from both designers and users
perspective have now stretched beyond the traditional usability,
incorporating abstract and subjective concepts. This has led to a shift
in human computer interaction research communities- focus; a shift
that focuses on achieving user experience (UX) by not only fulfilling
conventional usability needs but also those that go beyond them. The
term UX, although widely spread and given significant importance,
lacks consensus in its unified definition. In this paper, we survey
various UX definitions and modeling frameworks and examine them
as the foundation for proposing a UX evolution lifecycle framework
for understanding UX in detail. In the proposed framework we identify
the building blocks of UX and discuss how UX evolves in various
phases. The framework can be used as a tool to understand experience
requirements and evaluate them, resulting in better UX design and
hence improved user satisfaction.
Abstract: With the intention of screening for heavy metal
tolerance, a number of bacteria were isolated and characterized from
a pristine soil. Two Gram positive isolates were identified as
Paenibacillus sp. and Bacillus thuringeinsis. Tolerance of Cd2+, Cu2+
and Zn2+ by these bacteria was studied and found that both bacteria
were highly sensitive to Cu2+ compared to other two metals. Both
bacteria showed the same pattern of metal tolerance in the order Zn+
> Cd2+ > Cu2+. When the metal tolerance in both bacteria was
compared, Paenibacillus sp. showed the highest sensitivity to Cu2+
where as B. thuringiensis showed highest sensitivity to Cd2+ and Zn2+
.These findings revealed the potential of Paenibacillus sp. in
developing a biosensor to detect Cu2+ in environmental samples.
Abstract: Sweet cherries (Prunus avium L.) contain various
phenolic compounds which contribute to total antioxidant activity.
Total polyphenols, tannins, flavonoids and anthocyanins, and
antioxidant capacity in a fruits of a number of selected sweet cherry
genotypes were investigated. Total polyphenols content ranged from
4.12 to 8.34 mg gallic acid equivantents/g dry fruit weight and total
tannins content ranged from 0.19 to 1.95 mg gallic acid equivalent/g
dry fruit weight. Total flavonoids were within the range 0.42-1.56 mg
of rutin equivalents/g dry fruit weight and total anthocyanins content
were between 0.35 and 0.69 mg cyanidin 3-glucoside equivalent/ g
dry fruit weight. Although sweet cherry fruits are a significant source
of different phenolic compounds, antioxidant activity of sweet
cherries is not related only with the total polyphenolics, flavonoids or
anthocyanins.
Abstract: Names are important in many societies, even in technologically oriented ones which use e.g. ID systems to identify individual people. Names such as surnames are the most important as they are used in many processes, such as identifying of people and genealogical research. On the other hand variation of names can be a major problem for the identification and search for people, e.g. web search or security reasons. Name matching presumes a-priori that the recorded name written in one alphabet reflects the phonetic identity of two samples or some transcription error in copying a previously recorded name. We add to this the lode that the two names imply the same person. This paper describes name variations and some basic description of various name matching algorithms developed to overcome name variation and to find reasonable variants of names which can be used to further increasing mismatches for record linkage and name search. The implementation contains algorithms for computing a range of fuzzy matching based on different types of algorithms, e.g. composite and hybrid methods and allowing us to test and measure algorithms for accuracy. NYSIIS, LIG2 and Phonex have been shown to perform well and provided sufficient flexibility to be included in the linkage/matching process for optimising name searching.
Abstract: Financial forecasting is an example of signal processing problems. A number of ways to train/learn the network are available. We have used Levenberg-Marquardt algorithm for error back-propagation for weight adjustment. Pre-processing of data has reduced much of the variation at large scale to small scale, reducing the variation of training data.
Abstract: In the stadium structure, the significant dynamic
responses such as resonance or similar behavior can be occurred by
spectator rhythmical activities. Thus, accurate analysis and precise
investigation of stadium structure that is subjected to dynamic loads
are required for practical design and serviceability check of stadium
structures. Moreover, it is desirable to measure and analyze the
dynamic loads of spectator activities because these dynamic loads can
not be easily expressed in numerical formula. In this study, various
dynamic loads induced by spectator movements are measured and
analyzed. These dynamic loads induced by spectators movement of
stadium structure can be classified into the impact load and the
periodic load. These dynamic loads can be expressed as Fourier
harmonic load. And, these dynamic loads could be applied for the
accurate vibration analysis of a stadium structure.
Abstract: The ARMrayan Multimedia Mobile CMS (Content
Management System) is the first mobile CMS that gives the
opportunity to users for creating multimedia J2ME mobile
applications with their desired content, design and logo; simply,
without any need for writing even a line of code. The low-level
programming and compatibility problems of the J2ME, along with
UI designing difficulties, makes it hard for most people –even
programmers- to broadcast their content to the widespread mobile
phones used by nearly all people. This system provides user-friendly,
PC-based tools for creating a tree index of pages and inserting
multiple multimedia contents (e.g. sound, video and picture) in each
page for creating a J2ME mobile application. The output is a standalone
Java mobile application that has a user interface, shows texts
and pictures and plays music and videos regardless of the type of
devices used as long as the devices support the J2ME platform.
Bitmap fonts have also been used thus Middle Eastern languages can
be easily supported on all mobile phone devices. We omitted
programming concepts for users in order to simplify multimedia
content-oriented mobile applictaion designing for use in educational,
cultural or marketing centers. Ordinary operators can now create a
variety of multimedia mobile applications such as tutorials,
catalogues, books, and guides in minutes rather than months.
Simplicity and power has been the goal of this CMS. In this paper,
we present the software engineered-designed concepts of the
ARMrayan MCMS along with the implementation challenges faces
and solutions adapted.
Abstract: The feature of HIV genome is in a wide range because
of it is highly heterogeneous. Hence, the infection ability of the virus changes related with different chemokine receptors. From this point,
R5 and X4 HIV viruses use CCR5 and CXCR5 coreceptors respectively while R5X4 viruses can utilize both coreceptors. Recently, in Bioinformatics, R5X4 viruses have been studied to
classify by using the coreceptors of HIV genome.
The aim of this study is to develop the optimal Multilayer
Perceptron (MLP) for high classification accuracy of HIV sub-type viruses. To accomplish this purpose, the unit number in hidden layer
was incremented one by one, from one to a particular number. The statistical data of R5X4, R5 and X4 viruses was preprocessed by the
signal processing methods. Accessible residues of these virus sequences were extracted and modeled by Auto-Regressive Model
(AR) due to the dimension of residues is large and different from each other. Finally the pre-processed dataset was used to evolve MLP with various number of hidden units to determine R5X4
viruses. Furthermore, ROC analysis was used to figure out the optimal MLP structure.
Abstract: In this article, we introduce a mechanism by which the same concept of differentiated services used in network transmission can be applied to provide quality of service levels to pervasive systems applications. The classical DiffServ model, including marking and classification, assured forwarding, and expedited forwarding, are all utilized to create quality of service guarantees for various pervasive applications requiring different levels of quality of service. Through a collection of various sensors, personal devices, and data sources, the transmission of contextsensitive data can automatically occur within a pervasive system with a given quality of service level. Triggers, initiators, sources, and receivers are four entities labeled in our mechanism. An explanation of the role of each is provided, and how quality of service is guaranteed.
Abstract: Chemical and physical functionalization of multiwalled
carbon nanotubes (MWCNT) has been commonly practiced to
achieve better dispersion of carbon nanotubes (CNTs) in polymer
matrix. This work describes various functionalization methods (acidtreatment,
non-ionic surfactant treatment with TritonX-100),
fabrication of MWCNT/PP nanocomposites via melt blending and
characterization of mechanical properties. Microscopy analysis
(FESEM, TEM, XPS) showed effective purification of MWCNTs
under acid treatment, and better dispersion under both chemical and
physical functionalization techniques combined, in their respective
order. Tensile tests showed increase in tensile strength for the
nanocomposites that contain MWCNTs up to 2 wt%. A decrease in
tensile strength was seen in samples that contain 4 wt% of MWCNTs
for both raw and Triton X-100 functionalized, signifying MWCNT
degradation/rebundling at composition with higher content of
MWCNTs. For the acid-treated MWCNTs, however, the tensile
results showed slight improvement even at 4wt%, indicating effective
dispersion of MWCNTs.
Abstract: We introduce an algorithm based on the
morphological shared-weight neural network. Being nonlinear and
translation-invariant, the MSNN can be used to create better
generalization during face recognition. Feature extraction is
performed on grayscale images using hit-miss transforms that are
independent of gray-level shifts. The output is then learned by
interacting with the classification process. The feature extraction and
classification networks are trained together, allowing the MSNN to
simultaneously learn feature extraction and classification for a face.
For evaluation, we test for robustness under variations in gray levels
and noise while varying the network-s configuration to optimize
recognition efficiency and processing time. Results show that the
MSNN performs better for grayscale image pattern classification
than ordinary neural networks.
Abstract: Three dimensional simulations are carried out to estimate the effect of wind direction, wind speed and geometry on the flow and dispersion of vehicular pollutant in a street canyon. The pollutant sources are motor vehicles passing between the two buildings. Suitable emission factors for petrol and diesel vehicles at varying vehicle speed are used for the estimation of the rate of emission from the streets. The dispersion of automobile pollutant released from the street is simulated by introducing vehicular emission source term as a fixed-flux boundary condition at the ground level over the road. The emission source term is suitably calculated by adopting emission factors from literature for varying conditions of street traffic. It is observed that increase in wind angle disturbs the symmetric pattern of pollution distribution along the street length. The concentration increases in the far end of the street as compared to the near end.
Abstract: Extended Kalman Filter (EKF) is probably the most
widely used estimation algorithm for nonlinear systems. However,
not only it has difficulties arising from linearization but also many
times it becomes numerically unstable because of computer round off
errors that occur in the process of its implementation. To overcome
linearization limitations, the unscented transformation (UT) was
developed as a method to propagate mean and covariance
information through nonlinear transformations. Kalman filter that
uses UT for calculation of the first two statistical moments is called
Unscented Kalman Filter (UKF). Square-root form of UKF (SRUKF)
developed by Rudolph van der Merwe and Eric Wan to
achieve numerical stability and guarantee positive semi-definiteness
of the Kalman filter covariances. This paper develops another
implementation of SR-UKF for sequential update measurement
equation, and also derives a new UD covariance factorization filter
for the implementation of UKF. This filter is equivalent to UKF but
is computationally more efficient.
Abstract: In this study, Li4SiO4 powder was successfully
synthesized via sol gel method followed by drying at 150oC. Lithium
oxide, Li2O and silicon oxide, SiO2 were used as the starting
materials with citric acid as the chelating agent. The obtained powder
was then sintered at various temperatures. Crystallographic phase
analysis, morphology and ionic conductivity were investigated
systematically employing X-ray diffraction, Fourier Transform
Infrared, Scanning Electron Microscopy and AC impedance
spectroscopy. XRD result showed the formation of pure monoclinic
Li4SiO4 crystal structure with lattice parameters a = 5.140 Å, b =
6.094 Å, c = 5.293 Å, β = 90o in the sample sintered at 750oC. This
observation was confirmed by FTIR analysis. The bulk conductivity
of this sample at room temperature was 3.35 × 10-6 S cm-1 and the
highest bulk conductivity of 1.16 × 10-4 S cm-1 was obtained at
100°C. The results indicated that, the Li4SiO4 compound has
potential to be used as host for LISICON structured solid electrolyte
for low temperature application.