Abstract: The two-dimensional gel electrophoresis method
(2-DE) is widely used in Proteomics to separate thousands of proteins
in a sample. By comparing the protein expression levels of proteins in
a normal sample with those in a diseased one, it is possible to identify
a meaningful set of marker proteins for the targeted disease. The major
shortcomings of this approach involve inherent noises and irregular
geometric distortions of spots observed in 2-DE images. Various
experimental conditions can be the major causes of these problems. In
the protein analysis of samples, these problems eventually lead to
incorrect conclusions. In order to minimize the influence of these
problems, this paper proposes a partition based pair extension method
that performs spot-matching on a set of gel images multiple times and
segregates more reliable mapping results which can improve the
accuracy of gel image analysis. The improved accuracy of the
proposed method is analyzed through various experiments on real
2-DE images of human liver tissues.
Abstract: Dynamics of a vapour bubble generated due to a high local energy input near a circular thin bronze plate in the absence of the buoyancy forces is numerically investigated in this paper. The bubble is generated near a thin bronze plate and during the growth and collapse of the bubble, it deforms the nearby plate. The Boundary Integral Equation Method is employed for numerical simulation of the problem. The fluid is assumed to be incompressible, irrotational and inviscid and the surface tension on the bubble boundary is neglected. Therefore the fluid flow around the vapour bubble can be assumed as a potential flow. Furthermore, the thin bronze plate is assumed to have perfectly plastic behaviour. Results show that the displacement of the circular thin bronze plate has considerable effect on the dynamics of its nearby vapour bubble. It is found that by decreasing the thickness of the thin bronze plate, the growth and collapse rate of the bubble becomes higher and consequently the lifetime of the bubble becomes shorter.
Abstract: A passive system "Qanat" is collection of some
underground wells. A mother-well was dug in a place far from the
city where they could reach to the water table maybe 100 meters
underground, they dug other wells to direct water toward the city,
with minimum possible gradient. Using the slope of the earth they
could bring water close to the surface in the city. The source of water
or the appearance of Qanat, land slope and the ownership lines are
the important and effective factors in the formation of routes and the
segment division of lands to the extent that making use of Qanat as
the techniques of extracting underground waters creates a channel of
routes with an organic order and hierarchy coinciding the slope of
land and it also guides the Qanat waters in the tradition texture of salt
desert and border provinces of it. Qanats are excavated in a specified
distinction from each other. The quantity of water provided by
Qanats depends on the kind of land, distance from mountain,
geographical situation of them and the rate of water supply from the
underground land. The rate of underground waters, possibility of
Qanat excavation, number of Qanats and rate of their water supply
from one hand and the quantity of cultivable fertile lands from the
other hand are the important natural factors making the size of cities.
In the same manner the cities with several Qanats have multi central
textures. The location of cities is in direct relation with land quality,
soil fertility and possibility of using underground water by excavating
Qanats. Observing the allowable distance for Qanat watering is a
determining factor for distance between villages and cities.
Topography, land slope, soil quality, watering system, ownership,
kind of cultivation, etc. are the effective factors in directing Qanats
for excavation and guiding water toward the cultivable lands and it
also causes the formation of different textures in land division of
farming provinces. Several divisions such as orderly and wide, inorderly,
thin and long, comb like, etc. are the introduction to organic
order. And at the same time they are complete coincidence with
environmental conditions in the typical development of ecological
architecture and planning in the traditional cities and settlements
order.
Abstract: In this research, we study a control method of a multivehicle
system while considering the limitation of communication
range for each vehicles. When we control networked vehicles with
limitation of communication range, it is important to control the
communication network structure of a multi-vehicle system in order
to keep the network-s connectivity. From this, we especially aim to
control the network structure to the target structure. We formulate
the networked multi-vehicle system with some disturbance and the
communication constraints as a hybrid dynamical system, and then
we study the optimal control problems of the system. It is shown
that the system converge to the objective network structure in finite
time when the system is controlled by the receding horizon method.
Additionally, the optimal control probrems are convertible into the
mixed integer problems and these problems are solvable by some
branch and bound algorithm.
Abstract: Power consumption of nodes in ad hoc networks is a
critical issue as they predominantly operate on batteries. In order to
improve the lifetime of an ad hoc network, all the nodes must be
utilized evenly and the power required for connections must be
minimized. In this project a link layer algorithm known as Power
Aware medium Access Control (PAMAC) protocol is proposed
which enables the network layer to select a route with minimum total
power requirement among the possible routes between a source and a
destination provided all nodes in the routes have battery capacity
above a threshold. When the battery capacity goes below a
predefined threshold, routes going through these nodes will be
avoided and these nodes will act only as source and destination.
Further, the first few nodes whose battery power drained to the set
threshold value are pushed to the exterior part of the network and the
nodes in the exterior are brought to the interior. Since less total
power is required to forward packets for each connection. The
network layer protocol AOMDV is basically an extension to the
AODV routing protocol. AOMDV is designed to form multiple
routes to the destination and it also avoid the loop formation so that it
reduces the unnecessary congestion to the channel. In this project, the
performance of AOMDV is evaluated using PAMAC as a MAC layer
protocol and the average power consumption, throughput and
average end to end delay of the network are calculated and the results
are compared with that of the other network layer protocol AODV.
Abstract: Simultaneous effects of temperature, immersion time, salt concentration, sucrose concentration, pressure and convective dryer temperature on the combined osmotic dehydration - convective drying of edible button mushrooms were investigated. Experiments were designed according to Central Composite Design with six factors each at five different levels. Response Surface Methodology (RSM) was used to determine the optimum processing conditions that yield maximum water loss and rehydration ratio and minimum solid gain and shrinkage in osmotic-convective drying of edible button mushrooms. Applying surfaces profiler and contour plots optimum operation conditions were found to be temperature of 39 °C, immersion time of 164 min, salt concentration of 14%, sucrose concentration of 53%, pressure of 600 mbar and drying temperature of 40 °C. At these optimum conditions, water loss, solid gain, rehydration ratio and shrinkage were found to be 63.38 (g/100 g initial sample), 3.17 (g/100 g initial sample), 2.26 and 7.15%, respectively.
Abstract: Using Dynamic Bayesian Networks (DBN) to model genetic regulatory networks from gene expression data is one of the major paradigms for inferring the interactions among genes. Averaging a collection of models for predicting network is desired, rather than relying on a single high scoring model. In this paper, two kinds of model searching approaches are compared, which are Greedy hill-climbing Search with Restarts (GSR) and Markov Chain Monte Carlo (MCMC) methods. The GSR is preferred in many papers, but there is no such comparison study about which one is better for DBN models. Different types of experiments have been carried out to try to give a benchmark test to these approaches. Our experimental results demonstrated that on average the MCMC methods outperform the GSR in accuracy of predicted network, and having the comparable performance in time efficiency. By proposing the different variations of MCMC and employing simulated annealing strategy, the MCMC methods become more efficient and stable. Apart from comparisons between these approaches, another objective of this study is to investigate the feasibility of using DBN modeling approaches for inferring gene networks from few snapshots of high dimensional gene profiles. Through synthetic data experiments as well as systematic data experiments, the experimental results revealed how the performances of these approaches can be influenced as the target gene network varies in the network size, data size, as well as system complexity.
Abstract: All over the world, including the Middle and East
European countries, sustainable tillage and sowing technologies are
applied increasingly broadly with a view to optimising soil resources,
mitigating soil degradation processes, saving energy resources,
preserving biological diversity, etc. As a result, altered conditions of
tillage and sowing technological processes are faced inevitably. The
purpose of this study is to determine the seedbed topsoil hardness
when using a combined sowing coulter in different sustainable tillage
technologies. The research involved a combined coulter consisting
of two dissected blade discs and a shoe coulter. In order to determine
soil hardness at the seedbed area, a multipenetrometer was used. It
was found by experimental studies that in loosened soil, a combined
sowing coulter equally suppresses the furrow bottom, walls and soil
near the furrow; therefore, here, soil hardness was similar at all
researched depths and no significant differences were established. In
loosened and compacted (double-rolled) soil, the impact of a
combined coulter on the hardness of seedbed soil surface was more
considerable at a depth of 2 mm. Soil hardness at the furrow bottom
and walls to a distance of up to 26 mm was 1.1 MPa. At a depth of 10
mm, the greatest hardness was established at the furrow bottom. In
loosened and heavily compacted (rolled for 6 times) soil, at a depth
of 2 and 10 mm a combined coulter most of all compacted the furrow
bottom, which has a hardness of 1.8 MPa. At a depth of 20 mm, soil
hardness within the whole investigated area varied insignificantly and
fluctuated by around 2.0 MPa. The hardness of furrow walls and soil
near the furrow was by approximately 1.0 MPa lower than that at the
furrow bottom
Abstract: Potato is one of the main components of warm meals in Latvia. Consumption of fried potatoes in Latvia is the highest comparing to Nordic and other Baltic countries. Therefore acrylamide (AA) intake coming from fried potatoes in population might be high as well. The aim of the research was to determine AA content in traditionally cooked potatoes bred and cultivated in Latvia. Five common Latvian potato varieties were selected: Lenora, Brasla, Imanta, Zile and Madara. A two-year research was conducted during two periods: just after harvesting and after six months of storage. The following cooking methods were used: shallow frying (150 ± 5 °C); deep-fat frying (180 ± 5 °C) and roasting (210 ± 5 °C). Time and temperature was recorded during frying. AA was extracted from potatoes by solid phase extraction and AA content was determined by LC-MS/MS. AA content significantly differs (p
Abstract: Medical Tourism is a new development in Taiwan
recently. The willingness and barriers of potential tourists from
China to participate medical tourism are studied. A questionnaire
survey is conducted and the SPSS software is used to analyze data.
The results show that under one fifth of respondents express full
medical tourism participation willingness. Among travel barriers
toward medical tourism, “insufficient information of medical tourism
trip", “not enough time", “no companion", “worrying about
unsatisfied itinerary." are perceived the most important barriers.
Abstract: Stream Control Transmission Protocol (SCTP) has been
proposed to provide reliable transport of real-time communications.
Due to its attractive features, such as multi-streaming and multihoming,
the SCTP is often expected to be an alternative protocol
for TCP and UDP. In the original SCTP standard, the secondary path
is mainly regarded as a redundancy. Recently, most of researches
have focused on extending the SCTP to enable a host to send its
packets to a destination over multiple paths simultaneously. In order
to transfer packets concurrently over the multiple paths, the SCTP
should be well designed to avoid unnecessary fast retransmission
and the mis-estimation of congestion window size through the paths.
Therefore, we propose an Enhanced Cooperative ACK SCTP (ECASCTP)
to improve the path recovery efficiency of multi-homed host
which is under concurrent multiple transfer mode. We evaluated the
performance of our proposed scheme using ns-2 simulation in terms
of cwnd variation, path recovery time, and goodput. Our scheme
provides better performance in lossy and path asymmetric networks.
Abstract: The human head representations usually are based on
the morphological – structural components of a real model. Over the
time became more and more necessary to achieve full virtual models
that comply very rigorous with the specifications of the human
anatomy. Still, making and using a model perfectly fitted with the
real anatomy is a difficult task, because it requires large hardware
resources and significant times for processing. That is why it is
necessary to choose the best compromise solution, which keeps the
right balance between the details perfection and the resources
consumption, in order to obtain facial animations with real-time
rendering. We will present here the way in which we achieved such a
3D system that we intend to use as a base point in order to create
facial animations with real-time rendering, used in medicine to find
and to identify different types of pathologies.
Abstract: Photoselective plastic films with thermic properties
are now available so that greenhouses clad with such plastics exhibit
a higher degree of “Greenhouse Effect” with a consequent increase in
night time temperature. In this study, we investigate the potential
benefits of a range of thermic plastic films used as greenhouse cover
materials on the vegetative and reproductive growth and development
of Iceberg lettuce (Lactuca sativa L). Transplants were grown under
thermic films and destructively harvested 4, 5, and 6 weeks after
transplanting. Thermic films can increase night temperatures up to 2
⁰C reducing the wide fluctuation in greenhouse temperature during
winter compared to the standard commercial film and consequently
increased the yield (leaf number, fresh weight, and dry weight) of
lettuce plants. Lettuce plants grown under Clear film respond to cold
stress by the accumulation of secondary products (phenolics, and
flavonoids).
Abstract: A large amount of valuable information is available in
plain text clinical reports. New techniques and technologies are
applied to extract information from these reports. In this study, we
developed a domain based software system to transform 600
Otorhinolaryngology discharge notes to a structured form for
extracting clinical data from the discharge notes. In order to decrease
the system process time discharge notes were transformed into a data
table after preprocessing. Several word lists were constituted to
identify common section in the discharge notes, including patient
history, age, problems, and diagnosis etc. N-gram method was used
for discovering terms co-Occurrences within each section. Using this
method a dataset of concept candidates has been generated for the
validation step, and then Predictive Apriori algorithm for Association
Rule Mining (ARM) was applied to validate candidate concepts.
Abstract: The paper presents an investigation in to the effect of neural network predictive control of UPFC on the transient stability performance of a multimachine power system. The proposed controller consists of a neural network model of the test system. This model is used to predict the future control inputs using the damped Gauss-Newton method which employs ‘backtracking’ as the line search method for step selection. The benchmark 2 area, 4 machine system that mimics the behavior of large power systems is taken as the test system for the study and is subjected to three phase short circuit faults at different locations over a wide range of operating conditions. The simulation results clearly establish the robustness of the proposed controller to the fault location, an increase in the critical clearing time for the circuit breakers, and an improved damping of the power oscillations as compared to the conventional PI controller.
Abstract: Fruits and vegetables are the essentials of a healthy
diet, mainly because of their antioxidant properties contributing to
disease blockage especially for some certain types of cancer. Being a
favourite fruit, citrus are produced for economic and commercial
purposes worldwide. Particularly, lemon fruit (Citrus limon L.), has
an important place in export products of Turkey. Lemon has a great
importance on human nutrition with regard to being a source of
nutrients, flavonoids, vitamin C and minerals. It is used for food
flavouring and pickling and also processed for lemonade. By
processing citrus into fruit juices, consumption may increase and also
become easier. Like many fruits and vegetables lemons are cheap and
abundant during harvesting period, while they are quite expensive in
other seasons. Lemon juice and concentrate production allows
consumers to get benefits from lemon fruit in any time of the year.
Lemonade is getting in to the focus of consumers’ attention
preferring non-carbonated drinks. The demand of healthy, convenient
functional foods affects consumer trends through innovative
products. For this reason, lemonade could be enriched with different
natural herb extracts such as ginger (Zingiber officinale), linden (Tilia
cordata), and mint (Mentha piperita).
Abstract: This paper presents a hybrid association control
scheme that can maintain load balancing among access points in the
wireless LANs and can satisfy the quality of service requirements of
the multimedia traffic applications. The proposed model is
mathematically described as a linear programming model. Simulation
study and analysis were conducted in order to demonstrate the
performance of the proposed hybrid load balancing and association
control scheme. Simulation results shows that the proposed scheme
outperforms the other schemes in term of the percentage of blocking
and the quality of the data transfer rate providing to the multimedia
and real-time applications.
Abstract: This paper reports our analysis of 163 ks observations
of PSR J0538+2817 with the Rossi X-Ray Timing Explorer
(RXTE).The pulse profiles, detected up to 60 keV, show a single
peak asin the case for radio frequency. The profile is well described
by one Gaussians function with full width at half maximum (FWHM)
0.04794. We compared the difference of arrival time between radio
and X-ray pulse profiles for the first time. It turns out that the phase
of radio emits precede the X-ray by 8.7 ± 4.5 ms. Furthermore we
obtained the pulse profiles in the energy ranges of 2.29-6.18 keV,
6.18-12.63 keV and 12.63-17.36 keV. The intensity of pulses
decreases with the increasing energy range. We discuss the emission
geometry in our work.
Abstract: In this paper an analysis of blackouts in electric power
transmission systems is implemented using a model and studied in
simple networks with a regular topology. The proposed model
describes load demand and network improvements evolving on a
slow timescale as well as the fast dynamics of cascading overloads
and outages.
Abstract: The ARMrayan Multimedia Mobile CMS (Content
Management System) is the first mobile CMS that gives the
opportunity to users for creating multimedia J2ME mobile
applications with their desired content, design and logo; simply,
without any need for writing even a line of code. The low-level
programming and compatibility problems of the J2ME, along with
UI designing difficulties, makes it hard for most people –even
programmers- to broadcast their content to the widespread mobile
phones used by nearly all people. This system provides user-friendly,
PC-based tools for creating a tree index of pages and inserting
multiple multimedia contents (e.g. sound, video and picture) in each
page for creating a J2ME mobile application. The output is a standalone
Java mobile application that has a user interface, shows texts
and pictures and plays music and videos regardless of the type of
devices used as long as the devices support the J2ME platform.
Bitmap fonts have also been used thus Middle Eastern languages can
be easily supported on all mobile phone devices. We omitted
programming concepts for users in order to simplify multimedia
content-oriented mobile applictaion designing for use in educational,
cultural or marketing centers. Ordinary operators can now create a
variety of multimedia mobile applications such as tutorials,
catalogues, books, and guides in minutes rather than months.
Simplicity and power has been the goal of this CMS. In this paper,
we present the software engineered-designed concepts of the
ARMrayan MCMS along with the implementation challenges faces
and solutions adapted.