Abstract: Bioassay is the measurement of the potency of a chemical substance by its effect on a living animal or plant tissue. Bioassay data and chemical structures from pharmacokinetic and drug metabolism screening are mined from and housed in multiple databases. Bioassay prediction is calculated accordingly to determine further advancement. This paper proposes a four-step preprocessing of datasets for improving the bioassay predictions. The first step is instance selection in which dataset is categorized into training, testing, and validation sets. The second step is discretization that partitions the data in consideration of accuracy vs. precision. The third step is normalization where data are normalized between 0 and 1 for subsequent machine learning processing. The fourth step is feature selection where key chemical properties and attributes are generated. The streamlined results are then analyzed for the prediction of effectiveness by various machine learning algorithms including Pipeline Pilot, R, Weka, and Excel. Experiments and evaluations reveal the effectiveness of various combination of preprocessing steps and machine learning algorithms in more consistent and accurate prediction.
Abstract: Instance selection (IS) technique is used to reduce
the data size to improve the performance of data mining methods.
Recently, to process very large data set, several proposed methods
divide the training set into some disjoint subsets and apply IS
algorithms independently to each subset. In this paper, we analyze
the limitation of these methods and give our viewpoint about how to
divide and conquer in IS procedure. Then, based on fast condensed
nearest neighbor (FCNN) rule, we propose a large data sets instance
selection method with MapReduce framework. Besides ensuring the
prediction accuracy and reduction rate, it has two desirable properties:
First, it reduces the work load in the aggregation node; Second
and most important, it produces the same result with the sequential
version, which other parallel methods cannot achieve. We evaluate the
performance of FCNN-MR on one small data set and two large data
sets. The experimental results show that it is effective and practical.
Abstract: Corporate credit rating prediction is one of the most important topics, which has been studied by researchers in the last decade. Over the last decade, researchers are pushing the limit to enhance the exactness of the corporate credit rating prediction model by applying several data-driven tools including statistical and artificial intelligence methods. Among them, multiclass support vector machine (MSVM) has been widely applied due to its good predictability. However, heuristics, for example, parameters of a kernel function, appropriate feature and instance subset, has become the main reason for the critics on MSVM, as they have dictate the MSVM architectural variables. This study presents a hybrid MSVM model that is intended to optimize all the parameter such as feature selection, instance selection, and kernel parameter. Our model adopts genetic algorithm (GA) to simultaneously optimize multiple heterogeneous design factors of MSVM.