Abstract: The prediction of transmembrane helical segments
(TMHs) in membrane proteins is an important field in the
bioinformatics research. In this paper, a new method based on discrete
wavelet transform (DWT) has been developed to predict the number
and location of TMHs in membrane proteins. PDB coded as 1KQG
was chosen as an example to describe the prediction of the number and
location of TMHs in membrane proteins by using this method. To
access the effect of the method, 80 proteins with known 3D-structure
from Mptopo database are chosen at random as the test objects
(including 325 TMHs), 308 of which can be predicted accurately, the
average predicted accuracy is 96.3%. In addition, the above 80
membrane proteins are divided into 13 groups according to their
function and type. In particular, the results of the prediction of TMHs
of the 13 groups are satisfying.
Abstract: This paper has introduced a slope photogrammetric mapping using unmanned aerial vehicle. There are two units of UAV has been used in this study; namely; fixed wing and multi-rotor. Both UAVs were used to capture images at the study area. A consumer digital camera was mounted vertically at the bottom of UAV and captured the images at an altitude. The objectives of this study are to obtain three dimensional coordinates of slope area and to determine the accuracy of photogrammetric product produced from both UAVs. Several control points and checkpoints were established Real Time Kinematic Global Positioning System (RTK-GPS) in the study area. All acquired images from both UAVs went through all photogrammetric processes such as interior orientation, exterior orientation, aerial triangulation and bundle adjustment using photogrammetric software. Two primary results were produced in this study; namely; digital elevation model and digital orthophoto. Based on results, UAV system can be used to mapping slope area especially for limited budget and time constraints project.
Abstract: Planar systems of electrodes arranged on both sides of dielectric piezoelectric layer are applied in numerous transducers. They are capable of electronic beam-steering of generated wave both in azimuth and elevation. The wave-beam control is achieved by addressable driving of two-dimensional transducer through proper voltage supply of electrodes on opposite surfaces of the layer. In this paper a semi-analytical method of analysis of the considered transducer is proposed, which is a generalization of the well-known BIS-expansion method. It was earlier exploited with great success in the theory of interdigital transducers of surface acoustic waves, theory of elastic wave scattering by cracks and certain advanced electrostatic problems. The corresponding nontrivial electrostatic problem is formulated and solved numerically.
Abstract: Spatial and mobile computing evolves. This paper
describes a smart modeling platform called “GeoSEMA". This
approach tends to model multidimensional GeoSpatial Evolutionary
and Mobile Agents. Instead of 3D and location-based issues, there
are some other dimensions that may characterize spatial agents, e.g.
discrete-continuous time, agent behaviors. GeoSEMA is seen as a
devoted design pattern motivating temporal geographic-based
applications; it is a firm foundation for multipurpose and
multidimensional special-based applications. It deals with
multipurpose smart objects (buildings, shapes, missiles, etc.) by
stimulating geospatial agents.
Formally, GeoSEMA refers to geospatial, spatio-evolutive and
mobile space constituents where a conceptual geospatial space model
is given in this paper. In addition to modeling and categorizing
geospatial agents, the model incorporates the concept of inter-agents
event-based protocols. Finally, a rapid software-architecture
prototyping GeoSEMA platform is also given. It will be
implemented/ validated in the next phase of our work.
Abstract: The large and small-scale shaking table tests, which
was conducted for investigating damage evolution of piles inside
liquefied soil, are numerically simulated and experimental verified by the3D nonlinear finite element analysis. Damage evolution of
elasto-plastic circular steel piles and reinforced concrete (RC) one with cracking and yield of reinforcement are focused on, and the failure patterns and residual damages are captured by the proposed constitutive models. The superstructure excitation behind quay wall is
reproduced as well.
Abstract: This research paper is based upon the simulation of
gradient of mathematical functions and scalar fields using MATLAB.
Scalar fields, their gradient, contours and mesh/surfaces are
simulated using different related MATLAB tools and commands for
convenient presentation and understanding. Different mathematical
functions and scalar fields are examined here by taking their
gradient, visualizing results in 3D with different color shadings and
using other necessary relevant commands. In this way the outputs of
required functions help us to analyze and understand in a better way
as compared to just theoretical study of gradient.
Abstract: Volume rendering is widely used in medical CT image
visualization. Applying 3D image visualization to diagnosis
application can require accurate volume rendering with high
resolution. Interpolation is important in medical image processing
applications such as image compression or volume resampling.
However, it can distort the original image data because of edge
blurring or blocking effects when image enhancement procedures
were applied. In this paper, we proposed adaptive tension control
method exploiting gradient information to achieve high resolution
medical image enhancement in volume visualization, where restored
images are similar to original images as much as possible. The
experimental results show that the proposed method can improve
image quality associated with the adaptive tension control efficacy.
Abstract: An important step in three-dimensional reconstruction
and computer vision is camera calibration, whose objective is to
estimate the intrinsic and extrinsic parameters of each camera. In this
paper, two linear methods based on the different planes are given. In
both methods, the general plane is used to replace the calibration
object with very good precision. In the first method, after controlling
the camera to undergo five times- translation movements and taking
pictures of the orthogonal planes, a set of linear constraints of the
camera intrinsic parameters is then derived by means of homography
matrix. The second method is to get all camera parameters by taking
only one picture of a given radius circle. experiments on simulated
data and real images,indicate that our method is reasonable and is a
good supplement to camera calibration.
Abstract: This paper presents a low-voltage low-power differential linear transconductor with near rail-to-rail input swing. Based on the current-mirror OTA topology, the proposed transconductor combines the Flipped Voltage Follower (FVF) technique to linearize the transconductor behavior that leads to class- AB linear operation and the virtual transistor technique to lower the effective threshold voltages of the transistors which offers an advantage in terms of low supply requirement. Design of the OTA has been discussed. It operates at supply voltages of about ±0.8V. Simulation results for 0.18μm TSMC CMOS technology show a good input range of 1Vpp with a high DC gain of 81.53dB and a total harmonic distortion of -40dB at 1MHz for an input of 1Vpp. The main aim of this paper is to present and compare new OTA design with high transconductance, which has a potential to be used in low voltage applications.
Abstract: In this paper we report a study aimed at determining
the most effective animation technique for representing ASL
(American Sign Language) finger-spelling. Specifically, in the study
we compare two commonly used 3D computer animation methods
(keyframe animation and motion capture) in order to ascertain which
technique produces the most 'accurate', 'readable', and 'close to
actual signing' (i.e. realistic) rendering of ASL finger-spelling. To
accomplish this goal we have developed 20 animated clips of fingerspelled
words and we have designed an experiment consisting of a
web survey with rating questions. 71 subjects ages 19-45 participated
in the study. Results showed that recognition of the words was
correlated with the method used to animate the signs. In particular,
keyframe technique produced the most accurate representation of the
signs (i.e., participants were more likely to identify the words
correctly in keyframed sequences rather than in motion captured
ones). Further, findings showed that the animation method had an
effect on the reported scores for readability and closeness to actual
signing; the estimated marginal mean readability and closeness was
greater for keyframed signs than for motion captured signs. To our
knowledge, this is the first study aimed at measuring and comparing
accuracy, readability and realism of ASL animations produced with
different techniques.
Abstract: The current of professional bicycle pedal-s
manufacturing model mostly used casting, forging, die-casting
processing methods, so the paper used 7075 aluminum alloy which is
to produce the bicycle parts most commonly, and employs the
rigid-plastic finite element (FE) DEFORMTM 3D software to simulate
and to analyze the professional bicycle pedal design. First we use Solid
works 2010 3D graphics software to design the professional bicycle
pedal of the mold and appearance, then import finite element (FE)
DEFORMTM 3D software for analysis. The paper used rigid-plastic
model analytical methods, and assuming mode to be rigid body. A
series of simulation analyses in which the variables depend on
different temperature of forging billet, friction factors, forging speed,
mold temperature are reveal to effective stress, effective strain, damage
and die radial load distribution for forging bicycle pedal. The analysis
results hope to provide professional bicycle pedal forming mold
references to identified whether suit with the finite element results for
high-strength design suitability of aluminum alloy.
Abstract: Organ motion, especially respiratory motion, is a technical challenge to radiation therapy planning and dosimetry. This motion induces displacements and deformation of the organ tissues within the irradiated region which need to be taken into account when simulating dose distribution during treatment. Finite element modeling (FEM) can provide a great insight into the mechanical behavior of the organs, since they are based on the biomechanical material properties, complex geometry of organs, and anatomical boundary conditions. In this paper we present an original approach that offers the possibility to combine image-based biomechanical models with particle transport simulations. We propose a new method to map material density information issued from CT images to deformable tetrahedral meshes. Based on the principle of mass conservation our method can correlate density variation of organ tissues with geometrical deformations during the different phases of the respiratory cycle. The first results are particularly encouraging, as local error quantification of density mapping on organ geometry and density variation with organ motion are performed to evaluate and validate our approach.
Abstract: Educational institutions are increasingly exploring the affordances of 3D virtual worlds for instruction and research, but few studies have been done to document current practices and uses of this emerging technology. This observational survey examines the virtual presences of 170 accredited educational institutions found in one such 3D virtual world called Second Life®, created by San- Francisco based Linden Lab®. The study focuses on what educational institutions look like in this virtual environment, the types of spaces educational institutions are creating or simulating, and what types of activities are being conducted.
Abstract: Rapid steps made in the field of Information and Communication Technology (ICT) has facilitated the development of teaching and learning methods and prepared them to serve the needs of an assorted educational institution. In other words, the information age has redefined the fundamentals and transformed the institutions and method of services delivery forever. The vision is the articulation of a desire to transform the method of teaching and learning could proceed through e-learning. E-learning is commonly deliberated to use of networked information and communications technology in teaching and learning practice. This paper deals the general aspects of the e-leaning with its issues, developments, opportunities and challenges, which can the higher institutions own.
Abstract: Skip cycle is a working strategy for spark ignition
engines, which allows changing the effective stroke of an engine
through skipping some of the four stroke cycles. This study proposes
a new mechanism to achieve the desired skip-cycle strategy for
internal combustion engines. The air and fuel leakage, which occurs
through the gas exchange, negatively affects the efficiency of the
engine at high speeds and loads. An absolute sealing is assured by
direct use of poppet valves, which are kept in fully closed position
during the skipped mode. All the components of the mechanism were
designed according to the real dimensions of the Anadolu Motor's
gasoline engine and modeled in 3D by means of CAD software. As
the mechanism operates in two modes, two dynamically equivalent
models are established to obtain the force and strength analysis for
critical components.
Abstract: Like any sentient organism, a smart environment
relies first and foremost on sensory data captured from the real
world. The sensory data come from sensor nodes of different
modalities deployed on different locations forming a Wireless Sensor
Network (WSN). Embedding smart sensors in humans has been a
research challenge due to the limitations imposed by these sensors
from computational capabilities to limited power. In this paper, we
first propose a practical WSN application that will enable blind
people to see what their neighboring partners can see. The challenge
is that the actual mapping between the input images to brain pattern
is too complex and not well understood. We also study the
connectivity problem in 3D/2D wireless sensor networks and propose
distributed efficient algorithms to accomplish the required
connectivity of the system. We provide a new connectivity algorithm
CDCA to connect disconnected parts of a network using cooperative
diversity. Through simulations, we analyze the connectivity gains
and energy savings provided by this novel form of cooperative
diversity in WSNs.
Abstract: Young patients suffering from Cerebral Palsy are
facing difficult choices concerning heavy surgeries. Diagnosis settled
by surgeons can be complex and on the other hand decision for
patient about getting or not such a surgery involves important
reflection effort. Proposed software combining prediction for
surgeries and post surgery kinematic values, and from 3D model
representing the patient is an innovative tool helpful for both patients
and medicine professionals. Beginning with analysis and
classification of kinematics values from Data Base extracted from
gait analysis in 3 separated clusters, it is possible to determine close
similarity between patients. Prediction surgery best adapted to
improve a patient gait is then determined by operating a suitable
preconditioned neural network. Finally, patient 3D modeling based
on kinematic values analysis, is animated thanks to post surgery
kinematic vectors characterizing the closest patient selected from
patients clustering.
Abstract: Numerical integration of initial boundary problem for advection equation in 3 ℜ is considered. The method used is
conditionally stable semi-Lagrangian advection scheme with high order interpolation on unstructured mesh. In order to increase time step integration the BFECC method with limiter TVD correction is used. The method is adopted on parallel graphic processor unit environment using NVIDIA CUDA and applied in Navier-Stokes solver. It is shown that the calculation on NVIDIA GeForce 8800
GPU is 184 times faster than on one processor AMDX2 4800+ CPU. The method is extended to the incompressible fluid dynamics solver. Flow over a Cylinder for 3D case is compared to the experimental data.
Abstract: CEMTool is a command style design and analyzing
package for scientific and technological algorithm and a matrix based
computation language. In this paper, we present new 2D & 3D
finite element method (FEM) packages for CEMTool. We discuss
the detailed structures and the important features of pre-processor,
solver, and post-processor of CEMTool 2D & 3D FEM packages. In
contrast to the existing MATLAB PDE Toolbox, our proposed FEM
packages can deal with the combination of the reserved words. Also,
we can control the mesh in a very effective way. With the introduction
of new mesh generation algorithm and fast solving technique, our
FEM packages can guarantee the shorter computational time than
MATLAB PDE Toolbox. Consequently, with our new FEM packages,
we can overcome some disadvantages or limitations of the existing
MATLAB PDE Toolbox.
Abstract: The explosion of interest in online gaming and
virtual worlds is leading many universities to investigate
possible educational applications of the new environments.
In this paper we explore the possibilities of 3D online worlds
for teacher education, particularly the field experience
component. Drawing upon two pedagogical examples, we
suggest that virtual simulations may, with certain limitations,
create safe spaces that allow preservice teachers to adopt
alternate identities and interact safely with the “other." In so
doing they may become aware of the constructed nature of
social categories and gain the essential pedagogical skill of
perspective-taking. We suggest that, ultimately, the ability to
be the principal creators of themselves in virtual environments
can increase their ability to do the same in the real world.