Abstract: The rapid improvement of the microprocessor and network has made it possible for the PC cluster to compete with conventional supercomputers. Lots of high throughput type of applications can be satisfied by using the current desktop PCs, especially for those in PC classrooms, and leave the supercomputers for the demands from large scale high performance parallel computations. This paper presents our development on enabling an automated deployment mechanism for cluster computing to utilize the computing power of PCs such as reside in PC classroom. After well deployment, these PCs can be transformed into a pre-configured cluster computing resource immediately without touching the existing education/training environment installed on these PCs. Thus, the training activities will not be affected by this additional activity to harvest idle computing cycles. The time and manpower required to build and manage a computing platform in geographically distributed PC classrooms also can be reduced by this development.
Abstract: Composites based on a biodegradable polycaprolactone (PCL) containing 0.5, 1.0 and 2.0 wt % of titanium dioxide (TiO2) micro and nanoparticles were prepared by melt mixing and the effect of filler type and contents on the thermal properties, dynamic-mechanical behaviour and morphology were investigated. Measurements of storage modulus and loss modulus by dynamic mechanical analysis (DMA) showed better results for microfilled PCL/TiO2 composites than nanofilled composites, with the same filler content. DSC analysis showed that the Tg and Tc of micro and nanocomposites were slightly lower than those of neat PCL. The crystallinity of the PCL increased with the addition of TiO2 micro and nanoparticles; however, the cc for the PCL was unchanged with micro TiO2 content. The thermal stability of PCL/TiO2 composites were characterized using thermogravimetric analysis (TGA). The initial weight loss (5 wt %) occurs at slightly higher temperature with micro and nano TiO2 addition and with increasing TiO2 content.
Abstract: Attachment of the circulating monocytes to the
endothelium is the earliest detectable events during formation of
atherosclerosis. The adhesion molecules, chemokines and matrix
proteases genes were identified to be expressed in atherogenesis.
Expressions of these genes may influence structural integrity of the
luminal endothelium. The aim of this study is to relate changes in the
ultrastructural morphology of the aortic luminal surface and gene
expressions of the endothelial surface, chemokine and MMP-12 in
normal and hypercholesterolemic rabbits. Luminal endothelial
surface from rabbit aortic tissue was examined by scanning electron
microscopy (SEM) using low vacuum mode to ascertain
ultrastructural changes in development of atherosclerotic lesion. Gene
expression of adhesion molecules, MCP-1 and MMP-12 were studied
by Real-time PCR. Ultrastructural observations of the aortic luminal
surface exhibited changes from normal regular smooth intact
endothelium to irregular luminal surface including marked globular
appearance and ruptures of the membrane layer. Real-time PCR
demonstrated differentially expressed of studied genes in
atherosclerotic tissues. The appearance of ultrastructural changes in
aortic tissue of hypercholesterolemic rabbits is suggested to have
relation with underlying changes of endothelial surface molecules,
chemokine and MMP-12 gene expressions.
Abstract: Brucellosis is a zoonotic disease; its symptoms and appearances are not exclusive in human and its traditional diagnosis is based on culture, serological methods and conventional PCR. For more sensitive, specific detection and differentiation of Brucella spp., the real time PCR method is recommended. This research has performed to determine the presence and prevalence of Brucella spp. and differentiation of Brucella abortus and Brucella melitensis in house mouse (Mus musculus) in west of Iran. A TaqMan analysis and single-step PCR was carried out in total 326 DNA of Mouse's spleen samples. From the total number of 326 samples, 128 (39.27%) gave positive results for Brucella spp. by conventional PCR, also 65 and 32 out of the 128 specimens were positive for B. melitensis, B. abortus, respectively. These results indicate a high presence of this pathogen in this area and that real time PCR is considerably faster than current standard methods for identification and differentiation of Brucella species. To our knowledge, this study is the first prevalence report of direct identification and differentiation of B. abortus and B. melitensis by real time PCR in mouse tissue samples in Iran.
Abstract: Methane is the second most important greenhouse gas
(GHG) after carbon dioxide. Amount of methane emission from
energy sector is increasing day by day with various activities. In
present work, various sources of methane emission from upstream,
middle stream and downstream of oil & gas sectors are identified and
categorised as per IPCC-2006 guidelines. Data were collected from
various oil & gas sector like (i) exploration & production of oil & gas
(ii) supply through pipelines (iii) refinery throughput & production
(iv) storage & transportation (v) usage. Methane emission factors for
various categories were determined applying Tier-II and Tier-I
approach using the collected data. Total methane emission from
Indian Oil & Gas sectors was thus estimated for the year 1990 to
2007.
Abstract: The paper deals with the comparison study of
harmonic detection methods for a shunt active power filter. The
%THD and the power factor value at the PCC point after
compensation are considered for the comparison. There are three
harmonic detection methods used in the paper that are synchronous
reference frame method, synchronous detection method, and DQ axis
with Fourier method. In addition, the ideal current source is used to
represent the active power filter by assuming an infinitely fast
controller action of the active power filter. The simulation results
show that the DQ axis with Fourier method provides the minimum
%THD after compensation compared with other methods. However,
the power factor value at the PCC point after compensation is slightly
lower than that of synchronous detection method.
Abstract: A novel interpolation scheme to extend usable spectrum
and upconvert in high performance D/A converters is addressed in this
paper. By adjusting the pulse width of cycle and the production circuit
of code, the expansion code is a null code or complementary code that
is interpolation process. What the times and codes of interpolation
decide DAC works in one of a normal mode or multi-mixer mode
so that convert the input digital data signal into normal signal or a
mixed analog signal having a mixer frequency that is higher than the
data frequency. Simulation results show that the novel scheme and
apparatus most extend the usable frequency spectrum into fifth to
sixth Nyquist zone beyond conventional DACs.
Abstract: A lot of recent research have spoken on the relation
between the increase of the homocysteinemia and some kinds of
cancer . For that, our study was based on the research of a possible
relation between the increase of the concentration of this amino-acid
in the plasma and the appearance of the disease of the Acute
Lymphoblastic Leukaemia in a part of Algerian children with Berber
origin in the East of Algeria . The study has done on 47 ill persons
with an average age of (09±06 ) years , with whom the disease has
diagnosed by blood and marrow examination in the hospital of blood
diseases in the CHU of Batna, and on 194 healthy witnesses of the
same age. The two groups were benefited by a dosage of the
concentration of the homocysteine vitamin B9 ,vitamin B12 , and
also of the study of special polymorphisms of indispensable enzymes
in the metabolism of this acid , and that by the use of the method (
Light cycler ) Real time PCR , on the following enzymes : MS (
C2756G ), MSR ( A66G ) ,MTHFR1 ( C677T ) and MTHFR2
(A1298C). The obtained results have revealed that the rate of the
homozygote muted genotype is the less frequent in the two groups ,
and that exist at list one genotype of each enzyme in the ill group and
in which the percentage exceed with remarkable way the same
genotype in the healthy group and we notice specially the muted
genotype GG of -the methionine synthetase-and the form TT of the
enzyme – methyline tetra hydrofolate reductase – We notice the
existence of considerable number of genotypes in the ill group lied
with characteristic increase of this Amino-acid ,and that for the
reduction of the biologic activity of these enzymes which become
inefficient in the transfer of the homocysteine into the methionine
and cause the diminution of the biologic activity of these enzymes
and with consequence the reduction of the percentage of methylic
radicals in the DNA of studied genes and that lead to the increase of
the activity and the capacity of transcription , and it-s so probably
that this last one is one of the factors of this disease especially if we
know that the specific check-up of vitamins is normal and similar in
the two groups , which ovoid the hypothesis of the reduction of
vitamins . We notice also that the heterozygote genotype is the less in
the sick category except the MTHFR2. Wild genotype is more
frequent in the witness group except MSR. Even these results are
partials; they open a new way in the genetic diagnosis of this
malicious disease which allow a precocious diagnosis and the use of
an effective and appropriated treatment in the same time.
Abstract: 115 samples of Labeo calbasu ranged 8.0-17.9cm
length with mean11.90±1.96 and 4.9-68.5g weight with mean
22.25±12.54 from the River Chenab, Southern Punjab, Pakistan were
analyzed to investigate length-weight relationships (LWR) of fish in
relation to condition factor (K). Standard length (SL), fork length
(FL), head length (HL) head width (HW), body girth (BG), dorsal fin
length (DFL), dorsal fin base (DFB), pectoral fin length (PcFL),
pelvic fin length (PvFL) and anal fin length (AFL) are found to be
highly correlated with increasing total length and wet body weight (r
> 0.500). Wet body weight has positive (r=0.540) and total length
has no correlation (r=0.344) with calculated Condition factor (K).
The slope “b" in the relationship is 3.27 and intercepts -2.2258.
Abstract: Message Passing Interface is widely used for Parallel
and Distributed Computing. MPICH and LAM are popular open
source MPIs available to the parallel computing community also
there are commercial MPIs, which performs better than MPICH etc.
In this paper, we discuss a commercial Message Passing Interface, CMPI
(C-DAC Message Passing Interface). C-MPI is an optimized
MPI for CLUMPS. It is found to be faster and more robust compared
to MPICH. We have compared performance of C-MPI and MPICH
on Gigabit Ethernet network.
Abstract: MMR vaccine failure had been reported globally and
here we report that it occurs now in India. Samples were collected from clinically suspected mumps cases were subjected for anti
mumps antibodies, virus isolation, RT-PCR, sequencing and
phylogenetic tree analysis. 56 samples collected from men and women belonging to various age groups. 30 had been vaccinated and
the status of 26 patients was unknown. 28 out of 30 samples were
found to be symptomatic and positive for Mumps IgM, indicating
active mumps infection in 93.4% of the vaccinated population. A
phylogenetic tree comparison of the clinical isolate is shown to be genotype C which is distinct from vaccine strain. Our study clearly sending warning signs that MMR vaccine is a failure and it needs to be revamped for the human use by increasing its efficacy and efficiency.
Abstract: In this paper, we present a method for edge
segmentation of satellite images based on 2-D Phase Congruency
(PC) model. The proposed approach is composed by two steps: The
contextual non linear smoothing algorithm (CNLS) is used to smooth
the input images. Then, the 2D stretched Gabor filter (S-G filter)
based on proposed angular variation is developed in order to avoid
the multiple responses in the previous work. An assessment of our
proposed method performance is provided in terms of accuracy of
satellite image edge segmentation. The proposed method is compared
with others known approaches.
Abstract: Understanding driving behavior is a complicated
researching topic. To describe accurate speed, flow and density of a
multiclass users traffic flow, an adequate model is needed. In this
study, we propose the concept of standard passenger car equivalent
(SPCE) instead of passenger car equivalent (PCE) to estimate the
influence of heavy vehicles and slow cars. Traffic cellular automata
model is employed to calibrate and validate the results. According to
the simulated results, the SPCE transformations present good
accuracy.
Abstract: In this paper, a new alignment method based on the particle swarm optimization (PSO) technique is presented. The PSO algorithm is used for locating the optimal coupling position with the highest optical power with three-degrees of freedom alignment. This algorithm gives an interesting results without a need to go thru the complex mathematical modeling of the alignment system. The proposed algorithm is validated considering practical tests considering the alignment of two Single Mode Fibers (SMF) and the alignment of SMF and PCF fibers.
Abstract: One of the major problems in genomic field is to perform sequence comparison on DNA and protein sequences. Executing sequence comparison on the DNA and protein data is a computationally intensive task. Sequence comparison is the basic step for all algorithms in protein sequences similarity. Parallel computing is an attractive solution to provide the computational power needed to speedup the lengthy process of the sequence comparison. Our main research is to enhance the protein sequence algorithm using dynamic programming method. In our approach, we parallelize the dynamic programming algorithm using multithreaded program to perform the sequence comparison and also developed a distributed protein database among many PCs using Remote Method Interface (RMI). As a result, we showed how different sizes of protein sequences data and computation of scoring matrix of these protein sequence on different number of processors affected the processing time and speed, as oppose to sequential processing.
Abstract: The machining of Carbon Fiber Reinforced Plastics
has come to constitute a significant challenge for many fields of
industry. The resulting surface finish of machined parts is of primary
concern for several reasons, including contact quality and impact on
the assembly. Therefore, the characterization and prediction of
roughness based on machining parameters are crucial for costeffective
operations. In this study, a PCD tool comprised of two
straight flutes was used to trim 32-ply carbon fiber laminates in a bid
to analyze the effects of the feed rate and the cutting speed on the
surface roughness. The results show that while the speed has but a
slight impact on the surface finish, the feed rate for its part affects it
strongly. A detailed study was also conducted on the effect of fiber
orientation on surface roughness, for quasi-isotropic laminates used
in aerospace. The resulting roughness profiles for the four-ply
orientation lay-up were compared, and it was found that fiber angle is
a critical parameter relating to surface roughness. One of the four
orientations studied led to very poor surface finishes, and
characteristic roughness profiles were identified and found to only
relate to the ply orientations of multilayer carbon fiber laminates.
Abstract: Thailand is one of the world-s leaders of rice
producers and exporters. Farmers have to increase the rice cultivation
frequency for serving the national increasing of export-s demand. It
leads to an elimination of rice residues by open burning which is the
quickest and costless management method. The open burning of rice
residue is one of the major causes of air pollutants and greenhouse
gas (GHG) emission. Under ASEAN agreement on trans-boundary
haze, Thailand set the master plan to mitigate air pollutant emission
from open burning of agricultural residues. In this master plan,
residues incorporation is promoted as alternative management
method to open burning. However, the assessment of both options in
term of GHG emission in order to investigate their contribution to
long-term global warming is still scarce or inexistent. In this study, a
method on rice residues assessment was first developed in order to
estimate and compare GHG emissions from rice cultivation under
rice residues open burning and the case with incorporation of the
same amount of rice residues, using 2006 IPCC guidelines for
emission estimation and Life Cycle Analysis technique. The
emission from rice cultivation in different preparing area practice
was also discussed.
Abstract: Many high-risk pathogens that cause disease in
humans are transmitted through various food items. Food-borne
disease constitutes a major public health problem. Assessment of the
quality and safety of foods is important in human health. Rapid and
easy detection of pathogenic organisms will facilitate precautionary
measures to maintain healthy food. The Polymerase Chain Reaction
(PCR) is a handy tool for rapid detection of low numbers of bacteria.
We have designed gene specific primers for most common food
borne pathogens such as Staphylococci, Salmonella and E.coli.
Bacteria were isolated from food samples of various food outlets and
identified using gene specific PCRs. We identified Staphylococci,
Salmonella and E.coli O157 using gene specific primers by rapid and
direct PCR technique in various food samples. This study helps us in
getting a complete picture of the various pathogens that threaten to
cause and spread food borne diseases and it would also enable
establishment of a routine procedure and methodology for rapid
identification of food borne bacteria using the rapid technique of
direct PCR. This study will also enable us to judge the efficiency of
present food safety steps taken by food manufacturers and exporters.
Abstract: This paper presents the decoder design for the single error correcting and double error detecting code proposed by the authors in an earlier paper. The speed of error detection and correction of a code is largely dependent upon the associated encoder and decoder circuits. The complexity and the speed of such circuits are determined by the number of 1?s in the parity check matrix (PCM). The number of 1?s in the parity check matrix for the code proposed by the authors are fewer than in any currently known single error correcting/double error detecting code. This results in simplified encoding and decoding circuitry for error detection and correction.
Abstract: Coarse and fine particulate matter were collected at a
residential area at Vashi, Navi Mumbai and the filter samples were
analysed for trace elements using PIXE technique. The trend of
particulate matter showed higher concentrations during winter than
the summer and monsoon concentration levels. High concentrations
of elements related to soil and sea salt were found in PM10 and
PM2.5. Also high levels of zinc and sulphur found in the particulates
of both the size fractions. EF analysis showed enrichment of Cu, Cr
and Mn only in the fine fraction suggesting their origin from
anthropogenic sources. The EF value was observed to be maximum
for As, Pb and Zn in the fine particulates. However, crustal derived
elements showed very low EF values indicating their origin from
soil. The PCA based multivariate studies identified soil, sea salt,
combustion and Se sources as common sources for coarse and
additionally an industrial source has also been identified for fine
particles.