Abstract: The similarity comparison of RNA secondary
structures is important in studying the functions of RNAs. In recent
years, most existing tools represent the secondary structures by
tree-based presentation and calculate the similarity by tree alignment
distance. Different to previous approaches, we propose a new method
based on maximum clique detection algorithm to extract the maximum
common structural elements in compared RNA secondary structures.
A new graph-based similarity measurement and maximum common
subgraph detection procedures for comparing purely RNA secondary
structures is introduced. Given two RNA secondary structures, the
proposed algorithm consists of a process to determine the score of the
structural similarity, followed by comparing vertices labelling, the
labelled edges and the exact degree of each vertex. The proposed
algorithm also consists of a process to extract the common structural
elements between compared secondary structures based on a proposed
maximum clique detection of the problem. This graph-based model
also can work with NC-IUB code to perform the pattern-based
searching. Therefore, it can be used to identify functional RNA motifs
from database or to extract common substructures between complex
RNA secondary structures. We have proved the performance of this
proposed algorithm by experimental results. It provides a new idea of
comparing RNA secondary structures. This tool is helpful to those
who are interested in structural bioinformatics.
Abstract: The vertex connectivity of a graph is the smallest number of vertices whose deletion separates the graph or makes it trivial. This work is devoted to the problem of vertex connectivity test of graphs in a distributed environment based on a general and a constructive approach. The contribution of this paper is threefold. First, using a preconstructed spanning tree of the considered graph, we present a protocol to test whether a given graph is 2-connected using only local knowledge. Second, we present an encoding of this protocol using graph relabeling systems. The last contribution is the implementation of this protocol in the message passing model. For a given graph G, where M is the number of its edges, N the number of its nodes and Δ is its degree, our algorithms need the following requirements: The first one uses O(Δ×N2) steps and O(Δ×logΔ) bits per node. The second one uses O(Δ×N2) messages, O(N2) time and O(Δ × logΔ) bits per node. Furthermore, the studied network is semi-anonymous: Only the root of the pre-constructed spanning tree needs to be identified.
Abstract: The psychological and physical trauma associated with the loss of a human limb can severely impact on the quality of life of an amputee rendering even the most basic of tasks very difficult. A prosthetic device can be of great benefit to the amputee in the performance of everyday human tasks. This paper outlines a proposed mechanical design of a 12 degree-of-freedom SMA actuated artificial hand. It is proposed that the SMA wires be embedded intrinsically within the hand structure which will allow for significant flexibility for use either as a prosthetic hand solution, or as part of a complete lower arm prosthetic solution. A modular approach is taken in the design facilitating ease of manufacture and assembly, and more importantly, also allows the end user to easily replace SMA wires in the event of failure. A biomimetric approach has been taken during the design process meaning that the artificial hand should replicate that of a human hand as far as is possible with due regard to functional requirements. The proposed design has been exposed to appropriate loading through the use of finite element analysis (FEA) to ensure that it is structurally sound. Theoretical analysis of the mechanical framework was also carried out to establish the limits of the angular displacement and velocity of the finger tip as well finger tip force generation. A combination of various polymers and Titanium, which are suitably lightweight, are proposed for the manufacture of the design.
Abstract: Fractional Fourier Transform is a generalization of the
classical Fourier Transform. The Fractional Fourier span in general
depends on the amplitude and phase functions of the signal and varies
with the transform order. However, with the development of the
Fractional Fourier filter banks, it is advantageous in some cases to
have different transform orders for different filter banks to achieve
better decorrelation of the windowed and overlapped time signal. We
present an expression that is useful for finding the perturbation in the
Fractional Fourier span due to the erroneous transform order and the
possible variation in the window shape and length. The expression is
based on the dependency of the time-Fractional Fourier span
Uncertainty on the amplitude and phase function of the signal. We
also show with the help of the developed expression that the
perturbation of span has a varying degree of sensitivity for varying
degree of transform order and the window coefficients.
Abstract: This paper maps the structure of the social network of
the 2011 class ofsixty graduate students of the Masters of Science
(Knowledge Management) programme at the Nanyang Technological
University, based on their friending relationships on Facebook. To
ensure anonymity, actual names were not used. Instead, they were
replaced with codes constructed from their gender, nationality, mode
of study, year of enrollment and a unique number. The relationships
between friends within the class, and among the seniors and alumni
of the programme wereplotted. UCINet and Pajek were used to plot
the sociogram, to compute the density, inclusivity, and degree,
global, betweenness, and Bonacich centralities, to partition the
students into two groups, namely, active and peripheral, and to
identify the cut-points. Homophily was investigated, and it was
observed for nationality and study mode. The groups students formed
on Facebook were also studied, and of fifteen groups, eight were
classified as dead, which we defined as those that have been inactive
for over two months.
Abstract: This paper presents the results of an experimental
investigation carried out to evaluate the shrinkage of High Strength
Concrete. High Strength Concrete is made by partially replacement of
cement by flyash and silica fume. The shrinkage of High Strength
Concrete has been studied using the different types of coarse and fine
aggregates i.e. Sandstone and Granite of 12.5 mm size and Yamuna
and Badarpur Sand. The Mix proportion of concrete is 1:0.8:2.2 with
water cement ratio as 0.30. Superplasticizer dose @ of 2% by weight
of cement is added to achieve the required degree of workability in
terms of compaction factor.
From the test results of the above investigation it can be concluded
that the shrinkage strain of High Strength Concrete increases with
age. The shrinkage strain of concrete with replacement of cement by
10% of Flyash and Silica fume respectively at various ages are more
(6 to 10%) than the shrinkage strain of concrete without Flyash and
Silica fume. The shrinkage strain of concrete with Badarpur sand as
Fine aggregate at 90 days is slightly less (10%) than that of concrete
with Yamuna Sand. Further, the shrinkage strain of concrete with
Granite as Coarse aggregate at 90 days is slightly less (6 to 7%) than
that of concrete with Sand stone as aggregate of same size. The
shrinkage strain of High Strength Concrete is also compared with that
of normal strength concrete. Test results show that the shrinkage
strain of high strength concrete is less than that of normal strength
concrete.
Abstract: In this paper, the semi–ratio–dependent predator-prey system with nonmonotonic functional response on time scales is investigated. By using the coincidence degree theory, sufficient conditions for existence of periodic solutions are obtained.
Abstract: Radio wave propagation on the road surface is a major
problem on wireless sensor network for traffic monitoring. In this
paper, we compare receiving signal strength on two scenarios 1) an
empty road and 2) a road with a vehicle. We investigate the effect of
antenna polarization and antenna height to the receiving signal
strength. The transmitting antenna is installed on the road surface.
The receiving signal is measured 360 degrees around the transmitting
antenna with the radius of 2.5 meters. Measurement results show the
receiving signal fluctuation around the transmitting antenna in both
scenarios. Receiving signal with vertical polarization antenna results
in higher signal strength than horizontal polarization antenna. The
optimum antenna elevation is 1 meter for both horizon and vertical
polarizations with the vehicle on the road. In the empty road, the
receiving signal level is unvarying with the elevation when the
elevation is greater than 1.5 meters.
Abstract: An active suspension system has been proposed to
improve the ride comfort. A quarter-car 2 degree-of-freedom (DOF)
system is designed and constructed on the basis of the concept of a
four-wheel independent suspension to simulate the actions of an
active vehicle suspension system. The purpose of a suspension
system is to support the vehicle body and increase ride comfort. The
aim of the work described in the paper was to illustrate the
application of fuzzy logic technique to the control of a continuously
damping automotive suspension system. The ride comfort is
improved by means of the reduction of the body acceleration caused
by the car body when road disturbances from smooth road and real
road roughness.
The paper describes also the model and controller used in the
study and discusses the vehicle response results obtained from a
range of road input simulations. In the conclusion, a comparison of
active suspension fuzzy control and Proportional Integration
derivative (PID) control is shown using MATLAB simulations.
Abstract: Successful public-private-partnership (PPP)
implementation can not be achieved without the active participation of
private sector companies. This paper examines the decision-making of
private sector companies in public works delivered by the PPP model
on the basis of social responsibility theory. It proposes that private
sector companies should indentify objectives of entering into PPP
projects, and shoulder relevant social responsibilities, while a
minimum return should also be guaranteed in their favor, so as to
compensate for their assumed risk and support them to take on
responsibilities in the future. The paper also gives a calculation
regarding the appropriate scale and reasonable degree of private sector
involvement in PPP projects through the cost-benefit analysis in a
specific case study, with the purpose to guide the private sector
companies to create a cooperation environment resembling
“symbiosis" and facilitate the smooth implementation of public works
delivered by the PPP model.
Abstract: Simulation of occlusal function during laboratory
material-s testing becomes essential in predicting long-term
performance before clinical usage. The aim of the study was to assess
the influence of chamfer preparation depth on failure risk of heat
pressed ceramic crowns with and without zirconia framework by
means of finite element analysis. 3D models of maxillary central
incisor, prepared for full ceramic crowns with different depths of the
chamfer margin (between 0.8 and 1.2 mm) and 6-degree tapered
walls together with the overlying crowns were generated using
literature data (Fig. 1, 2). The crowns were designed with and
without a zirconia framework with a thickness of 0.4 mm. For all
preparations and crowns, stresses in the pressed ceramic crown,
zirconia framework, pressed ceramic veneer, and dentin were
evaluated separately. The highest stresses were registered in the
dentin. The depth of the preparations had no significant influence on
the stress values of the teeth and pressed ceramics for the studied
cases, only for the zirconia framework. The zirconia framework
decreases the stress values in the veneer.
Abstract: We investigate an asymmetric connections model with a
dynamic network formation process, using an agent based simulation.
We permit heterogeneity of agents- value. Valuable persons seem
to have many links on real social networks. We focus on this
point of view, and examine whether valuable agents change the
structures of the terminal networks. Simulation reveals that valuable
agents diversify the terminal networks. We can not find evidence that
valuable agents increase the possibility that star networks survive the
dynamic process. We find that valuable agents disperse the degrees
of agents in each terminal network on an average.
Abstract: Atmospheric stability plays the most important role in
the transport and dispersion of air pollutants. Different methods are
used for stability determination with varying degrees of complexity.
Most of these methods are based on the relative magnitude of
convective and mechanical turbulence in atmospheric motions.
Richardson number, Monin-Obukhov length, Pasquill-Gifford
stability classification and Pasquill–Turner stability classification, are
the most common parameters and methods. The Pasquill–Turner
Method (PTM), which is employed in this study, makes use of
observations of wind speed, insolation and the time of day to classify
atmospheric stability with distinguishable indices. In this study, a
model is presented to determination of atmospheric stability
conditions using PTM. As a case study, meteorological data of
Mehrabad station in Tehran from 2000 to 2005 is applied to model.
Here, three different categories are considered to deduce the pattern
of stability conditions. First, the total pattern of stability classification
is obtained and results show that atmosphere is 38.77%, 27.26%,
33.97%, at stable, neutral and unstable condition, respectively. It is
also observed that days are mostly unstable (66.50%) while nights are
mostly stable (72.55%). Second, monthly and seasonal patterns are
derived and results indicate that relative frequency of stable
conditions decrease during January to June and increase during June
to December, while results for unstable conditions are exactly in
opposite manner. Autumn is the most stable season with relative
frequency of 50.69% for stable condition, whilst, it is 42.79%,
34.38% and 27.08% for winter, summer and spring, respectively.
Hourly stability pattern is the third category that points out that
unstable condition is dominant from approximately 03-15 GTM and
04-12 GTM for warm and cold seasons, respectively. Finally,
correlation between atmospheric stability and CO concentration is
achieved.
Abstract: Optical character recognition of cursive scripts
presents a number of challenging problems in both segmentation and
recognition processes in different languages, including Persian. In
order to overcome these problems, we use a newly developed Persian
word segmentation method and a recognition-based segmentation
technique to overcome its segmentation problems. This method is
robust as well as flexible. It also increases the system-s tolerances to
font variations. The implementation results of this method on a
comprehensive database show a high degree of accuracy which meets
the requirements for commercial use. Extended with a suitable pre
and post-processing, the method offers a simple and fast framework
to develop a full OCR system.
Abstract: Fatigue behaviors of Lead Zirconate Titanate (PZT)
ceramics under different amplitude of bipolar electrical loads have
been investigated. Fatigue behavior is represented by the change of
hysteresis loops and remnant polarization. Three levels of electrical
load amplitudes (1.00, 1.25 and 1.50 kV /mm) were applied in this
experimental. It was found that the remnant polarization decreased
significantly with the number of loading cycles. The degree of fatigue
degradation depends on the amplitude of electric field. The higher
amplitude exhibits the greater fatigue degradation.
Abstract: Predictions of flow and heat transfer characteristics and shape optimization in internally finned circular tubes have been performed on three-dimensional periodically fully developed turbulent flow and thermal fields. For a trapezoidal fin profile, the effects of fin height h, upper fin widths d1, lower fin widths d2, and helix angle of fin ? on transport phenomena are investigated for the condition of fin number of N = 30. The CFD and mathematical optimization technique are coupled in order to optimize the shape of internally finned tube. The optimal solutions of the design variables (i.e., upper and lower fin widths, fin height and helix angle) are numerically obtained by minimizing the pressure loss and maximizing the heat transfer rate, simultaneously, for the limiting conditions of d1 = 0.5~1.5 mm, d2 = 0.5~1.5 mm, h= 0.5~1.5mm, ? = 10~30 degrees. The fully developed flow and thermal fields are predicted using the finite volume method and the optimization is carried out by means of the multi-objective genetic algorithm that is widely used in the constrained nonlinear optimization problem.
Abstract: The purpose of this work is to establish the theoretical
foundations for calculating and designing the sublimationcondensation
processes in chemical apparatuses which are intended
for production of ultrafine powders of crystalline and amorphous
materials with controlled fractional composition. Theoretic analysis
of the primary processes of nucleation and growth kinetics of the
clusters according to the degree of super-saturation and the
homogeneous or heterogeneous nature of nucleation has been carried
out. The engineering design procedures of desublimation processes
have been offered and tested for modification of the Claus process.
Abstract: In this work, are discussed two formulations of the boundary element method - BEM to perform linear bending analysis of plates reinforced by beams. Both formulations are based on the Kirchhoff's hypothesis and they are obtained from the reciprocity theorem applied to zoned plates, where each sub-region defines a beam or a slab. In the first model the problem values are defined along the interfaces and the external boundary. Then, in order to reduce the number of degrees of freedom kinematics hypothesis are assumed along the beam cross section, leading to a second formulation where the collocation points are defined along the beam skeleton, instead of being placed on interfaces. On these formulations no approximation of the generalized forces along the interface is required. Moreover, compatibility and equilibrium conditions along the interface are automatically imposed by the integral equation. Thus, these formulations require less approximation and the total number of the degree s of freedom is reduced. In the numerical examples are discussed the differences between these two BEM formulations, comparing as well the results to a well-known finite element code.
Abstract: Photoselective plastic films with thermic properties
are now available so that greenhouses clad with such plastics exhibit
a higher degree of “Greenhouse Effect” with a consequent increase in
night time temperature. In this study, we investigate the potential
benefits of a range of thermic plastic films used as greenhouse cover
materials on the vegetative and reproductive growth and development
of Iceberg lettuce (Lactuca sativa L). Transplants were grown under
thermic films and destructively harvested 4, 5, and 6 weeks after
transplanting. Thermic films can increase night temperatures up to 2
⁰C reducing the wide fluctuation in greenhouse temperature during
winter compared to the standard commercial film and consequently
increased the yield (leaf number, fresh weight, and dry weight) of
lettuce plants. Lettuce plants grown under Clear film respond to cold
stress by the accumulation of secondary products (phenolics, and
flavonoids).
Abstract: A novel direction-of-arrival (DOA) estimation technique, which uses a conventional multiple signal classification (MUSIC) algorithm with periodic signals, is applied to a single RF-port parasitic array antenna for direction finding. Simulation results show that the proposed method gives high resolution (1 degree) DOA estimation in an uncorrelated signal environment. The novelty lies in that the MUSIC algorithm is applied to a simplified antenna configuration. Only one RF port and one analogue-to-digital converter (ADC) are used in this antenna, which features low DC power consumption, low cost, and ease of fabrication. Modifications to the conventional MUSIC algorithm do not bring much additional complexity. The proposed technique is also free from the negative influence by the mutual coupling between elements. Therefore, the technique has great potential to be implemented into the existing wireless mobile communications systems, especially at the power consumption limited mobile terminals, to provide additional position location (PL) services.