Abstract: In this study, a high accuracy protein-protein interaction
prediction method is developed. The importance of the proposed
method is that it only uses sequence information of proteins while
predicting interaction. The method extracts phylogenetic profiles of
proteins by using their sequence information. Combining the phylogenetic
profiles of two proteins by checking existence of homologs
in different species and fitting this combined profile into a statistical
model, it is possible to make predictions about the interaction status
of two proteins.
For this purpose, we apply a collection of pattern recognition
techniques on the dataset of combined phylogenetic profiles of protein
pairs. Support Vector Machines, Feature Extraction using ReliefF,
Naive Bayes Classification, K-Nearest Neighborhood Classification,
Decision Trees, and Random Forest Classification are the methods
we applied for finding the classification method that best predicts
the interaction status of protein pairs. Random Forest Classification
outperformed all other methods with a prediction accuracy of 76.93%
Abstract: This paper describes a 2.4 GHz passive switch mixer
and a 5/2.5 GHz voltage-controlled negative Gm oscillator (VCO)
with an inversion-mode MOS varactor. Both circuits are implemented
using a 1P8M 0.13 μm process. The switch mixer has an input
referred 1 dB compression point of -3.89 dBm and a conversion
gain of -0.96 dB when the local oscillator power is +2.5 dBm.
The VCO consumes only 1.75 mW, while drawing 1.45 mA from a
1.2 V supply voltage. In order to reduce the passives size, the VCO
natural oscillation frequency is 5 GHz. A clocked CMOS divideby-
two circuit is used for frequency division and quadrature phase
generation. The VCO has a -109 dBc/Hz phase noise at 1 MHz
frequency offset and a 2.35-2.5 GHz tuning range (after the frequency
division), thus complying with ZigBee requirements.
Abstract: Interactive web-based computer simulations are
needed by the medical community to replicate the experience of
surgical procedures as closely and realistically as possible without
the need to practice on corpses, animals and/or plastic models. In this
paper, we offer a review on current state of the research on
simulations of surgical threads, identify future needs and present our
proposed plans to meet them. Our goal is to create a physics-based
simulator, which will predict the behavior of surgical thread when
subjected to conditions commonly encountered during surgery. To
that end, we will i) develop three dimensional finite element models
based on the Cosserat theory of elasticity ii) test and feedback results
with the medical community and iii) develop a web-based user
interface to run/command our simulator and visualize the results. The
impacts of our research are that i) it will contribute to the
development of a new generation of training for medical school
students and ii) the simulator will be useful to expert surgeons in
developing new, better and less risky procedures.
Abstract: Skip cycle is a working strategy for spark ignition
engines, which allows changing the effective stroke of an engine
through skipping some of the four stroke cycles. This study proposes
a new mechanism to achieve the desired skip-cycle strategy for
internal combustion engines. The air and fuel leakage, which occurs
through the gas exchange, negatively affects the efficiency of the
engine at high speeds and loads. An absolute sealing is assured by
direct use of poppet valves, which are kept in fully closed position
during the skipped mode. All the components of the mechanism were
designed according to the real dimensions of the Anadolu Motor's
gasoline engine and modeled in 3D by means of CAD software. As
the mechanism operates in two modes, two dynamically equivalent
models are established to obtain the force and strength analysis for
critical components.
Abstract: Currently in many major cities, public transit schedules
are disseminated through lists of routes, grids of stop times and
static maps. This paper describes a web based geographic information
system which disseminates the same schedule information through
intuitive GIS techniques. Using data from Calgary, Canada, an map
based interface has been created to allow users to see routes, stops and
moving buses all at once. Zoom and pan controls as well as satellite
imagery allows users to apply their personal knowledge about the
local geography to achieve faster, and more pertinent transit results.
Using asynchronous requests to web services, users are immersed
in an application where buses and stops can be added and removed
interactively, without the need to wait for responses to HTTP requests.
Abstract: Trust management is one of the drawbacks in Peer-to-Peer (P2P) system. Lack of centralized control makes it difficult to control the behavior of the peers. Reputation system is one approach to provide trust assessment in P2P system. In this paper, we use fuzzy logic to model trust in a P2P environment. Our trust model combines first-hand (direct experience) and second-hand (reputation)information to allow peers to represent and reason with uncertainty regarding other peers' trustworthiness. Fuzzy logic can help in handling the imprecise nature and uncertainty of trust. Linguistic labels are used to enable peers assign a trust level intuitively. Our fuzzy trust model is flexible such that inference rules are used to weight first-hand and second-hand accordingly.
Abstract: Efficient and safe plant operation can only be
achieved if the operators are able to monitor all key process
parameters. Instrumentation is used to measure many process
variables, like temperatures, pressures, flow rates, compositions or
other product properties. Therefore Performance monitoring is a
suitable tool for operators. In this paper, we integrate rigorous
simulation model, data reconciliation and parameter estimation to
monitor process equipments and determine key performance
indicator (KPI) of them. The applied method here has been
implemented in two case studies.
Abstract: A cross sectional study design and standard
microbiological procedures were used to determine the prevalence
and antimicrobial susceptibility patterns of Escherichia coli,
Salmonella enterica serovar typhimurium and Vibrio cholerae O1
isolated from water and two fish species Rastrineobola argentea and
Oreochromis niloticus collected from fish landing beaches and
markets in the Lake Victoria Basin of western Kenya. Out of 162
samples analyzed, 133 (82.1%) were contaminated, with S.
typhimurium as the most prevalent (49.6%), followed by E. coli
(46.6%), and lastly V. cholerae (2.8%). All the bacteria isolates were
sensitive to ciprofloxacin. E. coli isolates were resistant to ampicillin,
tetracycline, cotrimoxazole, chloramphenical and gentamicin while
S. typhimurium isolates exhibited resistance to ampicillin,
tetracycline, and cotrimoxazole. The V. cholerae O1 isolates were
resistant to tetracycline and ampicillin. The high prevalence of drug
resistant enteric bacteria in water and fish from the study region
needs public health intervention from the local government.
Abstract: The most common cause of power transformer failures
is mechanical defect brought about by excessive vibration, which is
formed by the combination of multiples of a frequency of 120 Hz. In
this paper, the types of mechanical exciting forces applied to the
power transformer were classified, and the mechanical damage
mechanism of the power transformer was identified using the
vibration transfer route to the machine or structure. The general
effects of 120 Hz-vibration on the enclosure, bushing, Buchholz
relay, pressure release valve and tap changer of the transformer were
also examined.
Abstract: The purpose of this paper is to explore the relationship
between the customers- issues in company corporate governance and
the financial performance. At the beginning theoretical background
consisting stakeholder theory and corporate governance is presented.
On this theoretical background, the empirical research is built,
collecting data of 60 Czech joint stock companies- boards
considering their relationships with customers. Correlation analysis
and multivariate regression analysis were employed to test the sample
on two hypotheses. The weak positive correlation between
stakeholder approach and the company size was identified. But both
hypotheses were not supported, because there was no significant
relation of independent variables to financial performance.
Abstract: The effect of nano Co3O4 addition on the
superconducting properties of (Bi, Pb)-2223 system was studied. The
samples were prepared by the acetate coprecipitation method. The
Co3O4 with different sizes (10-30 nm and 30-50 nm) from x=0.00 to
0.05 was added to Bi1.6Pb0.4Sr2Ca2Cu3Oy(Co3O4)x. Phase analysis by
XRD method, microstructural examination by SEM and dc electrical
resistivity by four point probe method were done to characterize the
samples. The X-ray diffraction patterns of all the samples indicated
the majority Bi-2223 phase along with minor Bi-2212 and Bi-2201
phases. The volume fraction was estimated from the intensities of Bi-
2223, Bi-2212 and Bi-2201 phase. The sample with x=0.01 wt% of
the added Co3O4 (10-30 nm size) showed the highest volume fraction
of Bi-2223 phase (72%) and the highest superconducting transition
temperature, Tc (~102 K). The non-added sample showed the highest
Tc(~103 K) compared to added samples with nano Co3O4 (30-50 nm
size) added samples. Both the onset critical temperature Tc(onset)
and zero electrical resistivity temperature Tc(R=0) were in the range
of 103-115 ±1K and 91-103 ±1K respectively for samples with added
Co3O4 (10-30 nm and 30-50 nm).
Abstract: Most agricultural crops cultivated in Brazil are highly
nutrient demanding. Brazilian soils are generally acidic with low base
saturation and available nutrients. Demand for fertilizer application
has increased because the national agricultural sector expansion. To
improve productivity without environmental impact, there is the need
for the utilization of novel procedures and techniques to optimize
fertilizer application. This includes the digital soil mapping and GIS
application applied to mapping in different scales. This paper is
based on research, realized during 2005 to 2010 by Brazilian
Corporation for Agricultural Research (EMBRAPA) and its partners.
The purpose was to map soil fertility in national and regional scales.
A soil profile data set in national scale (1:5,000,000) was constructed
from the soil archives of Embrapa Soils, Rio de Janeiro and in the
regional scale (1:250,000) from COMIGO Cooperative soil data set,
Rio Verde, Brazil. The mapping was doing using ArcGIS 9.1 tools
from ESRI.
Abstract: This study examined the effects of 8-week Pilates training program on limits of stability (LOS) and abdominal muscle strength in young dancers. Twenty-four female volunteered and randomly assigned as experimental group (EG) or control group (CG). All subjects received the same dance lessons but the EG underwent an extra Pilates mat exercises for 40 minutes, three times a week, for 8 weeks. LOS was evaluated by the Biodex Balance System and the abdominal strength was measured by 30/60 seconds sit-ups test. One factor ANCOVA was used to examine the differences between groups after training. The results showed that the overall LOS scores at levels 2/8 and the 30/60 seconds sit-ups for the EG group pre- and post-training were changed from 22/38 % to 31/51 % and 20/33 times to 24/42 times, respectively. The study demonstrated that 8-week Pilates training can improve the LOS performance and abdominal strength in young dancers.
Abstract: Construction project control attempts to obtain real-time information and effectively enhance dynamic control and management via information sharing and analysis among project participants to eliminate construction conflicts and project delays. However, survey results for Taiwan indicate that construction commercial project management software is not widely accepted for subcontractors and suppliers. To solve the project communications problems among participants, this study presents a novel system called the Construction Dynamic Teams Communication Management (Con-DTCM) system for small-to-medium sized subcontractors and suppliers in Taiwanese Construction industry, and demonstrates that the Con-DTCM system responds to the most recent project information efficiently and enhances management of project teams (general contractor, suppliers and subcontractors) through web-based environment. Web-based technology effectively enhances information sharing during construction project management, and generates cost savings via the Internet. The main unique characteristic of the proposed Con-DTCM system is extremely user friendly and easily design compared with current commercial project management applications. The Con-DTCM system is applied to a case study of construction of a building project in Taiwan to confirm the proposed methodology and demonstrate the effectiveness of information sharing during the construction phase. The advantages of the Con-DTCM system are in improving project control and management efficiency for general contractors, and in providing dynamic project tracking and management, which enables subcontractors and suppliers to acquire the most recent project-related information. Furthermore, this study presents and implements a generic system architecture.
Abstract: Automated discovery of Rule is, due to its applicability, one of the most fundamental and important method in KDD. It has been an active research area in the recent past. Hierarchical representation allows us to easily manage the complexity of knowledge, to view the knowledge at different levels of details, and to focus our attention on the interesting aspects only. One of such efficient and easy to understand systems is Hierarchical Production rule (HPRs) system. A HPR, a standard production rule augmented with generality and specificity information, is of the following form: Decision If < condition> Generality Specificity . HPRs systems are capable of handling taxonomical structures inherent in the knowledge about the real world. This paper focuses on the issue of mining Quantified rules with crisp hierarchical structure using Genetic Programming (GP) approach to knowledge discovery. The post-processing scheme presented in this work uses Quantified production rules as initial individuals of GP and discovers hierarchical structure. In proposed approach rules are quantified by using Dempster Shafer theory. Suitable genetic operators are proposed for the suggested encoding. Based on the Subsumption Matrix(SM), an appropriate fitness function is suggested. Finally, Quantified Hierarchical Production Rules (HPRs) are generated from the discovered hierarchy, using Dempster Shafer theory. Experimental results are presented to demonstrate the performance of the proposed algorithm.
Abstract: Like any sentient organism, a smart environment
relies first and foremost on sensory data captured from the real
world. The sensory data come from sensor nodes of different
modalities deployed on different locations forming a Wireless Sensor
Network (WSN). Embedding smart sensors in humans has been a
research challenge due to the limitations imposed by these sensors
from computational capabilities to limited power. In this paper, we
first propose a practical WSN application that will enable blind
people to see what their neighboring partners can see. The challenge
is that the actual mapping between the input images to brain pattern
is too complex and not well understood. We also study the
connectivity problem in 3D/2D wireless sensor networks and propose
distributed efficient algorithms to accomplish the required
connectivity of the system. We provide a new connectivity algorithm
CDCA to connect disconnected parts of a network using cooperative
diversity. Through simulations, we analyze the connectivity gains
and energy savings provided by this novel form of cooperative
diversity in WSNs.
Abstract: In this paper, two versions of an iterative loopless
algorithm for the classical towers of Hanoi problem with O(1) storage complexity and O(2n) time complexity are presented. Based
on this algorithm the number of different moves in each of pegs with its direction is formulated.
Abstract: This paper investigates the problem of sampling from transactional data streams. We introduce CFISDS as a content based sampling algorithm that works on a landmark window model of data streams and preserve more informed sample in sample space. This algorithm that work based on closed frequent itemset mining tasks, first initiate a concept lattice using initial data, then update lattice structure using an incremental mechanism.Incremental mechanism insert, update and delete nodes in/from concept lattice in batch manner. Presented algorithm extracts the final samples on demand of user. Experimental results show the accuracy of CFISDS on synthetic and real datasets, despite on CFISDS algorithm is not faster than exist sampling algorithms such as Z and DSS.
Abstract: Broccoli has been widely recognized as a wealthy
vegetable which contains multiple nutrients with potent anti-cancer
properties. Lamb’s lettuce has been used as food for many centuries
but only recently became commercially available and literature is
therefore exiguous concerning these vegetables. The aim of this work
was to evaluate the influence of the extraction conditions on the yield
of phenolic compounds and the corresponding antioxidant capacity of
broccoli and lamb’s lettuce. The results indicate that lamb’s lettuce,
compared to broccoli, contains simultaneously a large amount of total
polyphenols as well as high antioxidant activity. It is clearly
demonstrated that extraction solvent significantly influences the
antioxidant activity. Methanol is the solvent that can globally
maximize the antioxidant extraction yield. The results presented
herein prove lamb’s lettuce as a very interesting source of
polyphenols, and thus a potential health-promoting food.
Abstract: A virtualized and virtual approach is presented on
academically preparing students to successfully engage at a strategic
perspective to understand those concerns and measures that are both
structured and not structured in the area of cyber security and
information assurance. The Master of Science in Cyber Security and
Information Assurance (MSCSIA) is a professional degree for those
who endeavor through technical and managerial measures to ensure
the security, confidentiality, integrity, authenticity, control,
availability and utility of the world-s computing and information
systems infrastructure. The National University Cyber Security and
Information Assurance program is offered as a Master-s degree. The
emphasis of the MSCSIA program uniquely includes hands-on
academic instruction using virtual computers. This past year, 2011,
the NU facility has become fully operational using system
architecture to provide a Virtual Education Laboratory (VEL)
accessible to both onsite and online students. The first student cohort
completed their MSCSIA training this past March 2, 2012 after
fulfilling 12 courses, for a total of 54 units of college credits. The
rapid pace scheduling of one course per month is immensely
challenging, perpetually changing, and virtually multifaceted. This
paper analyses these descriptive terms in consideration of those
globalization penetration breaches as present in today-s world of
cyber security. In addition, we present current NU practices to
mitigate risks.