Abstract: A systems approach model for prostate cancer in prostate duct, as a sub-system of the organism is developed. It is accomplished in two steps. First this research work starts with a nonlinear system of coupled Fokker-Plank equations which models continuous process of the system like motion of cells. Then extended to PDEs that include discontinuous processes like cell mutations, proliferation and deaths. The discontinuous processes is modeled by using intensity poisson processes. The model incorporates the features of the prostate duct. The system of PDEs spatial coordinate is along the proximal distal axis. Its parameters depend on features of the prostate duct. The movement of cells is biased towards distal region and mutations of prostate cancer cells is localized in the proximal region. Numerical solutions of the full system of equations are provided, and are exhibit traveling wave fronts phenomena. This motivates the use of the standard transformation to derive a canonically related system of ODEs for traveling wave solutions. The results obtained show persistence of prostate cancer by showing that the non-negative cone for the traveling wave system is time invariant. The traveling waves have a unique global attractor is proved also. Biologically, the global attractor verifies that evolution of prostate cancer stem cells exhibit the avascular tumor growth. These numerical solutions show that altering prostate stem cell movement or mutation of prostate cancer cells lead to avascular tumor. Conclusion with comments on clinical implications of the model is discussed.
Abstract: The spiral angle of the elementary cellulose fibril in
the wood cell wall, often called microfibril angle, (MFA). Microfibril
angle in hardwood is one of the key determinants of solid timber
performance due to its strong influence on the stiffness, strength,
shrinkage, swelling, thermal-dynamics mechanical properties and
dimensional stability of wood. Variation of MFA (degree) in the S2
layer of the cell walls among Acacia mangium trees was determined
using small-angle X-ray scattering (SAXS). The length and
orientation of the microfibrils of the cell walls in the irradiated
volume of the thin samples are measured using SAXS and optical
microscope for 3D surface measurement. The undetermined
parameters in the analysis are the MFA, (M) and the standard
deviation (σФ) of the intensity distribution arising from the wandering
of the fibril orientation about the mean value. Nine separate pairs of
values are determined for nine different values of the angle of the
incidence of the X-ray beam relative to the normal to the radial
direction in the sample. The results show good agreement. The
curve distribution of scattered intensity for the real cell wall structure
is compared with that calculated with that assembly of rectangular
cells with the same ratio of transverse to radial cell wall length. It is
demonstrated that for β = 45°, the peaks in the curve intensity
distribution for the real and the rectangular cells coincide. If this
peak position is Ф45, then the MFA can be determined from the
relation M = tan-1 (tan Ф45 / cos 45°), which is precise for rectangular
cells. It was found that 92.93% of the variation of MFA can be
attributed to the distance from pith to bark. Here we shall present our
results of the MFA in the cell wall with respect to its shape, structure
and the distance from pith to park as an important fast check and yet
accurate towards the quality of wood, its uses and application.
Abstract: Fructooligosaccharides derived from microbial enzyme especially from fungal sources has been received particular attention due to its beneficial effects as prebiotics and mass production. However, fungal fermentation is always cumbersome due to its broth rheology problem that will eventually affect the production of FOS. This study investigated the efficiency of immobilized cell system using rotating fibrous bed bioreactor (RFBB) in producing fructooligosaccharides (FOS). A comparative picture with respect to conventional stirred tank bioreactor (CSTB) and RFBB has been presented. To demonstrate the effect of agitation intensity and aeration rate, a laboratory-scale bioreactor 2.5 L was operated in three phases (high, medium, low) for 48 hours. Agitation speed has a great influence on P. simplicissimum fermentation for FOS production, where the volumetric FOS productivity using RFBB is increased with almost 4 fold compared to the FOS productivity in CSTB that only 0.319 g/L/h. Rate of FOS production increased up to 1.2 fold when immobilized cells system was employed at aeration rate similar to the freely suspended cells at 2.0 vvm.
Abstract: Many computational techniques were applied to
solution of heat conduction problem. Those techniques were the
finite difference (FD), finite element (FE) and recently meshless
methods. FE is commonly used in solution of equation of heat
conduction problem based on the summation of stiffness matrix of
elements and the solution of the final system of equations. Because
of summation process of finite element, convergence rate was
decreased. Hence in the present paper Cellular Automata (CA)
approach is presented for the solution of heat conduction problem.
Each cell considered as a fixed point in a regular grid lead to the
solution of a system of equations is substituted by discrete systems of
equations with small dimensions. Results show that CA can be used
for solution of heat conduction problem.
Abstract: The present models and simulation algorithms of intracellular stochastic kinetics are usually based on the premise that diffusion is so fast that the concentrations of all the involved species are homogeneous in space. However, recents experimental measurements of intracellular diffusion constants indicate that the assumption of a homogeneous well-stirred cytosol is not necessarily valid even for small prokaryotic cells. In this work a mathematical treatment of diffusion that can be incorporated in a stochastic algorithm simulating the dynamics of a reaction-diffusion system is presented. The movement of a molecule A from a region i to a region j of the space is represented as a first order reaction Ai k- ! Aj , where the rate constant k depends on the diffusion coefficient. The diffusion coefficients are modeled as function of the local concentration of the solutes, their intrinsic viscosities, their frictional coefficients and the temperature of the system. The stochastic time evolution of the system is given by the occurrence of diffusion events and chemical reaction events. At each time step an event (reaction or diffusion) is selected from a probability distribution of waiting times determined by the intrinsic reaction kinetics and diffusion dynamics. To demonstrate the method the simulation results of the reaction-diffusion system of chaperoneassisted protein folding in cytoplasm are shown.
Abstract: Sputum smear conversion after one month of antituberculosis
therapy in new smear positive pulmonary tuberculosis
patients (PTB+) is a vital indicator towards treatment success. The
objective of this study is to determine the rate of sputum smear
conversion in new PTB+ patients after one month under treatment of
National Institute of Diseases of the Chest and Hospital (NIDCH).
Analysis of sputum smear conversion was done by re-clinical
examination with sputum smear microscopic test after one month.
Socio-demographic and hematological parameters were evaluated to
perceive the correlation with the disease status. Among all enrolled
patients only 33.33% were available for follow up diagnosis and of
them only 42.86% patients turned to smear negative. Probably this
consequence is due to non-coherence to the proper disease
management. 66.67% and 78.78% patients reported low haemoglobin
and packed cell volume level respectively whereas 80% and 93.33%
patients accounted accelerated platelet count and erythrocyte
sedimentation rate correspondingly.
Abstract: Chemically defined Schlegel-s medium was modified
to improve production of cell growth and other metabolites that are
produced by fluorescent pseudomonad R62 strain. The modified
medium does not require pH control as pH changes are kept within ±
0.2 units of the initial pH 7.1 during fermentation. The siderophore
production was optimized for the fluorescent pseudomonad strain in
the modified medium containing 1% glycerol as a major carbon
source supplemented with 0.05% succinic acid and 0.5% Ltryptophan.
Indole-3 acetic acid (IAA) production was higher when
L-tryptophan was used at 0.5%. The 2,4- diacetylphloroglucinol
(DAPG) was higher with amended three trace elements in medium.
The optimized medium produced 2.28 g/l of dry cell mass and 900
mg/l of siderophore at the end of 36 h cultivation, while the
production levels of IAA and DAPG were 65 mg/l and 81 mg/l
respectively at the end of 48 h cultivation.
Abstract: Fuel and oxidant gas delivery plate, or fuel cell
plate, is a key component of a Proton Exchange Membrane (PEM)
fuel cell. To manufacture low-cost and high performance fuel cell
plates, advanced computer modeling and finite element structure
analysis are used as virtual prototyping tools for the optimization
of the plates at the early design stage. The present study examines
thermal stress analysis of the fuel cell plates that are produced
using a patented, low-cost fuel cell plate production technique
based on screen-printing. Design optimization is applied to
minimize the maximum stress within the plate, subject to strain
constraint with both geometry and material parameters as design
variables. The study reveals the characteristics of the printed
plates, and provides guidelines for the structure and material design
of the fuel cell plate.
Abstract: This paper evaluates performances of an adaptive noise
cancelling (ANC) based target detection algorithm on a set of real test
data supported by the Defense Evaluation Research Agency (DERA
UK) for multi-target wideband active sonar echolocation system. The
hybrid algorithm proposed is a combination of an adaptive ANC
neuro-fuzzy scheme in the first instance and followed by an iterative
optimum target motion estimation (TME) scheme. The neuro-fuzzy
scheme is based on the adaptive noise cancelling concept with the
core processor of ANFIS (adaptive neuro-fuzzy inference system) to
provide an effective fine tuned signal. The resultant output is then
sent as an input to the optimum TME scheme composed of twogauge
trimmed-mean (TM) levelization, discrete wavelet denoising
(WDeN), and optimal continuous wavelet transform (CWT) for
further denosing and targets identification. Its aim is to recover the
contact signals in an effective and efficient manner and then determine
the Doppler motion (radial range, velocity and acceleration) at very
low signal-to-noise ratio (SNR). Quantitative results have shown that
the hybrid algorithm have excellent performance in predicting targets-
Doppler motion within various target strength with the maximum
false detection of 1.5%.
Abstract: In this research, an aerobic composting method is
studied to reuse organic waste from rubber factory waste as soil fertilizer and to study the effect of cellulolytic microbial activator
(CMA) as the activator in the rubber factory waste composting. The
performance of the composting process was monitored as a function
of carbon and organic matter decomposition rate, temperature and
moisture content. The results indicate that the rubber factory waste is best composted with water hyacinth and sludge than composted
alone. In addition, the CMA is more affective when mixed with the rubber factory waste, water hyacinth and sludge since a good fertilizer is achieved. When adding CMA into the rubber factory
waste composted alone, the finished product does not achieve a
standard of fertilizer, especially the C/N ratio.
Finally, the finished products of composting rubber factory waste and water hyacinth and sludge (both CMA and without CMA), can be an environmental friendly alternative to solve the disposal problems of rubber factory waste. Since the C/N ratio, pH, moisture
content, temperature, and nutrients of the finished products are acceptable for agriculture use.
Abstract: This paper studies questions of continuous data dependence and uniqueness for solutions of initial boundary value problems in linear micropolar thermoelastic mixtures. Logarithmic convexity arguments are used to establish results with no definiteness assumptions upon the internal energy.
Abstract: A new composite sorbent based on carbonized rice
husk (CRH) and immobilized on it living cells and inactivated
cultural liquid containing antimicrobials metabolites of Bacillus
subtilis CK-245 is developed. The sorption and antimicrobic activity
of CRH concerning five species of Enterobacteriaceae is studied.
Prospects of use of developed sorbent in medicine and veterinary
science is shown.
Abstract: Understanding the consumption and production of
various metabolites of fibroblast conditioned media is needed for its
proper and optimized use in expansion of pluripotent stem cells. For
this purpose, we have used the HPLC method to analyse the
consumption of glucose and the production of lactate over time by
mouse embryonic fibroblasts. The experimental data have also been
compared with mathematical model fits. 0.025 moles of lactate was
produced after 72 hrs while the glucose concentration decreased from
0.017 moles to 0.011 moles. The mathematical model was able to
predict the trends of glucose consumption and lactate production.
Abstract: The mosaicing technique has been employed in more and more application fields, from entertainment to scientific ones. In the latter case, often the final evaluation is still left to human beings, that assess visually the quality of the mosaic. Many times, a lack of objective measurements in microscopic mosaicing may prevent the mosaic from being used as a starting image for further analysis. In this work we analyze three different metrics and indexes, in the domain of signal analysis, image analysis and visual quality, to measure the quality of different aspects of the mosaicing procedure, such as registration errors and visual quality. As the case study we consider the mosaicing algorithm we developed. The experiments have been carried out by considering mosaics with very different features: histological samples, that are made of detailed and contrasted images, and live stem cells, that show a very low contrast and low detail levels.
Abstract: An alarming emergence of multidrug-resistant strains
of the tuberculosis pathogen Mycobacterium tuberculosis and
continuing high worldwide incidence of tuberculosis has invigorated
the search for novel drug targets. The enzyme glutamate racemase
(MurI) in bacteria catalyzes the stereoconversion of L-glutamate to
D-glutamate which is a component of the peptidoglycan cell wall of
the bacterium. The inhibitors targeted against MurI from several
bacterial species have been patented and are advocated as promising
antibacterial agents. However there are none available against MurI
from Mycobacterium tuberculosis, due to the lack of its threedimensional
structure. This work accomplished two major objectives.
First, the tertiary structure of MtMurI was deduced computationally
through homology modeling using the templates from bacterial
homologues. It is speculated that like in other Gram-positive bacteria,
MtMurI exists as a dimer and many of the protein interactions at the
dimer interface are also conserved. Second, potent candidate
inhibitors against MtMurI were identified through docking against
already known inhibitors in other organisms.
Abstract: Over a million tonnes of cigarette butts (CBs) are produced worldwide annually. These CBs accumulate in the environment due to the poor biodegradability of the cellulose acetate filters and pose a serious environmental risk. This paper presents some of the results from a continuing study on recycling CBs into fired clay bricks. Properties including compressive strength, flexural strength, density, water absorption and thermal conductivity of fired clay bricks are reported and discussed. Furthermore, leaching of heavy metals from the manufactured clay bricks was tested. The results show that the density of fired bricks was reduced by about 8 – 30 %, depending on the percentage of CBs incorporated into the raw materials. The compressive strength of bricks tested was 12.57, 5.22 and 3.00 MPa for 2.5, 5.0 and 10 % CB content respectively. Water absorption and initial rate of absorption values increased as density, and hence porosity, of bricks decreased with increasing CB volume. The leaching test results revealed trace amounts of heavy metals.
Abstract: We report on the development of a model to
understand why the range of experience with respect to HIV
infection is so diverse, especially with respect to the latency period.
To investigate this, an agent-based approach is used to extract highlevel
behaviour which cannot be described analytically from the set
of interaction rules at the cellular level. A network of independent
matrices mimics the chain of lymph nodes. Dealing with massively
multi-agent systems requires major computational effort. However,
parallelisation methods are a natural consequence and advantage of
the multi-agent approach and, using the MPI library, are here
implemented, tested and optimized. Our current focus is on the
various implementations of the data transfer across the network.
Three communications strategies are proposed and tested, showing
that the most efficient approach is communication based on the
natural lymph-network connectivity.
Abstract: Face Recognition has always been a fascinating research area. It has drawn the attention of many researchers because of its various potential applications such as security systems, entertainment, criminal identification etc. Many supervised and unsupervised learning techniques have been reported so far. Principal Component Analysis (PCA), Self Organizing Maps (SOM) and Independent Component Analysis (ICA) are the three techniques among many others as proposed by different researchers for Face Recognition, known as the unsupervised techniques. This paper proposes integration of the two techniques, SOM and PCA, for dimensionality reduction and feature selection. Simulation results show that, though, the individual techniques SOM and PCA itself give excellent performance but the combination of these two can also be utilized for face recognition. Experimental results also indicate that for the given face database and the classifier used, SOM performs better as compared to other unsupervised learning techniques. A comparison of two proposed methodologies of SOM, Local and Global processing, shows the superiority of the later but at the cost of more computational time.
Abstract: Due to the non-linear characteristics of photovoltaic
(PV) array, PV systems typically are equipped with the capability of
maximum power point tracking (MPPT) feature. Moreover, in the
case of PV array under partially shaded conditions, hotspot problem
will occur which could damage the PV cells. Partial shading causes
multiple peaks in the P-V characteristic curves. This paper presents a
hybrid algorithm of Particle Swarm Optimization (PSO) and
Artificial Neural Network (ANN) MPPT algorithm for the detection
of global peak among the multiple peaks in order to extract the true
maximum energy from PV panel. The PV system consists of PV
array, dc-dc boost converter controlled by the proposed MPPT
algorithm and a resistive load. The system was simulated using
MATLAB/Simulink package. The simulation results show that the
proposed algorithm performs well to detect the true global peak
power. The results of the simulations are analyzed and discussed.
Abstract: The liberalization and privatization processes have
forced public utility companies to face new competitive challenges,
implementing strategies to gain market share and, at the same time,
keep the old customers. To this end, many companies have carried
out mergers, acquisitions and conglomerations in order to diversify
their business. This paper focuses on companies operating in the free
energy market in Italy. In the last decade, this sector has undergone
profound changes that have radically changed the competitive
scenario and have led companies to implement diversification
strategies of the business. Our work aims to evaluate the economic
and financial performances obtained by energy companies, following
the beginning of the liberalization process, verifying the possible
relationship with the implemented diversification strategies.