Abstract: A series of microarray experiments produces observations
of differential expression for thousands of genes across multiple
conditions.
Principal component analysis(PCA) has been widely used in
multivariate data analysis to reduce the dimensionality of the data in
order to simplify subsequent analysis and allow for summarization of
the data in a parsimonious manner. PCA, which can be implemented
via a singular value decomposition(SVD), is useful for analysis of
microarray data.
For application of PCA using SVD we use the DNA microarray
data for the small round blue cell tumors(SRBCT) of childhood
by Khan et al.(2001). To decide the number of components which
account for sufficient amount of information we draw scree plot.
Biplot, a graphic display associated with PCA, reveals important
features that exhibit relationship between variables and also the
relationship of variables with observations.
Abstract: The National Agricultural Biotechnology Information
Center (NABIC) plays a leading role in the biotechnology information
database for agricultural plants in Korea. Since 2002, we have
concentrated on functional genomics of major crops, building an
integrated biotechnology database for agro-biotech information that
focuses on bioinformatics of major agricultural resources such as rice,
Chinese cabbage, and microorganisms. In the NABIC,
integration-based biotechnology database provides useful information
through a user-friendly web interface that allows analysis of genome
infrastructure, multiple plants, microbial resources, and living
modified organisms.
Abstract: Research in quantum computation is looking for the consequences of having information encoding, processing and communication exploit the laws of quantum physics, i.e. the laws which govern the ultimate knowledge that we have, today, of the foreign world of elementary particles, as described by quantum mechanics. This paper starts with a short survey of the principles which underlie quantum computing, and of some of the major breakthroughs brought by the first ten to fifteen years of research in this domain; quantum algorithms and quantum teleportation are very biefly presented. The next sections are devoted to one among the many directions of current research in the quantum computation paradigm, namely quantum programming languages and their semantics. A few other hot topics and open problems in quantum information processing and communication are mentionned in few words in the concluding remarks, the most difficult of them being the physical implementation of a quantum computer. The interested reader will find a list of useful references at the end of the paper.
Abstract: In this manuscript, a wavelet-based blind
watermarking scheme has been proposed as a means to provide
security to authenticity of a fingerprint. The information used for
identification or verification of a fingerprint mainly lies in its
minutiae. By robust watermarking of the minutiae in the fingerprint
image itself, the useful information can be extracted accurately even
if the fingerprint is severely degraded. The minutiae are converted in
a binary watermark and embedding these watermarks in the detail
regions increases the robustness of watermarking, at little to no
additional impact on image quality. It has been experimentally shown
that when the minutiae is embedded into wavelet detail coefficients
of a fingerprint image in spread spectrum fashion using a
pseudorandom sequence, the robustness is observed to have a
proportional response while perceptual invisibility has an inversely
proportional response to amplification factor “K". The DWT-based
technique has been found to be very robust against noises,
geometrical distortions filtering and JPEG compression attacks and is
also found to give remarkably better performance than DCT-based
technique in terms of correlation coefficient and number of erroneous
minutiae.
Abstract: Wireless Sensor Networks (WSNs) are used to monitor/observe vast inaccessible regions through deployment of large number of sensor nodes in the sensing area. For majority of WSN applications, the collected data needs to be combined with geographic information of its origin to make it useful for the user; information received from remote Sensor Nodes (SNs) that are several hops away from base station/sink is meaningless without knowledge of its source. In addition to this, location information of SNs can also be used to propose/develop new network protocols for WSNs to improve their energy efficiency and lifetime. In this paper, range free localization protocols for WSNs have been proposed. The proposed protocols are based on weighted centroid localization technique, where the edge weights of SNs are decided by utilizing fuzzy logic inference for received signal strength and link quality between the nodes. The fuzzification is carried out using (i) Mamdani, (ii) Sugeno, and (iii) Combined Mamdani Sugeno fuzzy logic inference. Simulation results demonstrate that proposed protocols provide better accuracy in node localization compared to conventional centroid based localization protocols despite presence of unintentional radio frequency interference from radio frequency (RF) sources operating in same frequency band.
Abstract: Data Mining aims at discovering knowledge out of
data and presenting it in a form that is easily comprehensible to
humans. One of the useful applications in Egypt is the Cancer
management, especially the management of Acute Lymphoblastic
Leukemia or ALL, which is the most common type of cancer in
children.
This paper discusses the process of designing a prototype that can
help in the management of childhood ALL, which has a great
significance in the health care field. Besides, it has a social impact
on decreasing the rate of infection in children in Egypt. It also
provides valubale information about the distribution and
segmentation of ALL in Egypt, which may be linked to the possible
risk factors.
Undirected Knowledge Discovery is used since, in the case of this
research project, there is no target field as the data provided is
mainly subjective. This is done in order to quantify the subjective
variables. Therefore, the computer will be asked to identify
significant patterns in the provided medical data about ALL. This
may be achieved through collecting the data necessary for the
system, determimng the data mining technique to be used for the
system, and choosing the most suitable implementation tool for the
domain.
The research makes use of a data mining tool, Clementine, so as to
apply Decision Trees technique. We feed it with data extracted from
real-life cases taken from specialized Cancer Institutes. Relevant
medical cases details such as patient medical history and diagnosis
are analyzed, classified, and clustered in order to improve the disease
management.
Abstract: A novel nanofinishing process using improved ball
end magnetorheological (MR) finishing tool was developed for finishing of flat as well as 3D surfaces of ferromagnetic and non ferromagnetic workpieces. In this process a magnetically controlled
ball end of smart MR polishing fluid is generated at the tip surface of
the tool which is used as a finishing medium and it is guided to
follow the surface to be finished through computer controlled 3-axes
motion controller. The experiments were performed on ferromagnetic
workpiece surface in the developed MR finishing setup to study the effect of finishing time on final surface roughness. The performance
of present finishing process on final finished surface roughness was studied. The surface morphology was observed under scanning
electron microscopy and atomic force microscope. The final surface finish was obtained as low as 19.7 nm from the initial surface
roughness of 142.9 nm. The outcome of newly developed finishing process can be found useful in its applications in aerospace,
automotive, dies and molds manufacturing industries, semiconductor and optics machining etc.
Abstract: Green house effect has becomes a serious concern in
many countries due to the increase consumption of the fossil fuel.
There have been many studies to find an alternative power source.
Wind energy found to be one of the most useful solutions to help in
overcoming the air pollution and global. There is no agreed solution
to conversion of wind energy to electrical energy. In this paper, the
advantages of using a Switched Reluctance Generator (SRG) for
wind energy applications. The theoretical study of the self excitation
of a SRG and the determination of the variable parameters in a SRG
design are discussed. The design parameters for the maximum power
output of the SRG are computed using Matlab simulation. The
designs of the circuit to control the variable parameters in a SRG to
provide the maximum power output are also discussed.
Abstract: Fake finger submission attack is a major problem in fingerprint recognition systems. In this paper, we introduce an aliveness detection method based on multiple static features, which derived from a single fingerprint image. The static features are comprised of individual pore spacing, residual noise and several first order statistics. Specifically, correlation filter is adopted to address individual pore spacing. The multiple static features are useful to reflect the physiological and statistical characteristics of live and fake fingerprint. The classification can be made by calculating the liveness scores from each feature and fusing the scores through a classifier. In our dataset, we compare nine classifiers and the best classification rate at 85% is attained by using a Reduced Multivariate Polynomial classifier. Our approach is faster and more convenient for aliveness check for field applications.
Abstract: The paper is dealing by testing of ceramic cutting
tools with an interrupted machining. Tests will be provided on fixture
– interrupted cut simulator. This simulator has 4 mouldings on
circumference and cutting edge is put a shocks during 1 revolution.
Criteria of tool wear are destruction of cutting tool or 6000 shocks.
Like testing cutting tool material will be products of Sandvik
Coromant 6190, 620, 650 and 670. Machined materials was be steels
15 128 (13MoCrV6). Cutting speed (408 m.min-1 and 580 m.min-1)
and cutting feed (0,15 mm; 0,2 mm; 0,25 mm and 0,3 mm) were
variable parameters and cutting depth was constant parameter.
Abstract: This paper aims at developing a multilevel fuzzy
decision support model for urban rail transit planning schemes in
China under the background that China is presently experiencing an
unprecedented construction of urban rail transit. In this study, an
appropriate model using multilevel fuzzy comprehensive evaluation
method is developed. In the decision process, the followings are
considered as the influential objectives: traveler attraction,
environment protection, project feasibility and operation. In addition,
consistent matrix analysis method is used to determine the weights
between objectives and the weights between the objectives-
sub-indictors, which reduces the work caused by repeated
establishment of the decision matrix on the basis of ensuring the
consistency of decision matrix. The application results show that
multilevel fuzzy decision model can perfectly deal with the
multivariable and multilevel decision process, which is particularly
useful in the resolution of multilevel decision-making problem of
urban rail transit planning schemes.
Abstract: Recently, a lot of attention has been devoted to
advanced techniques of system modeling. PNN(polynomial neural
network) is a GMDH-type algorithm (Group Method of Data
Handling) which is one of the useful method for modeling nonlinear
systems but PNN performance depends strongly on the number of
input variables and the order of polynomial which are determined by
trial and error. In this paper, we introduce GPNN (genetic
polynomial neural network) to improve the performance of PNN.
GPNN determines the number of input variables and the order of all
neurons with GA (genetic algorithm). We use GA to search between
all possible values for the number of input variables and the order of
polynomial. GPNN performance is obtained by two nonlinear
systems. the quadratic equation and the time series Dow Jones stock
index are two case studies for obtaining the GPNN performance.
Abstract: Deaminated lesions were produced via nitrosative oxidation of natural nucleobases; uracul (Ura, U) from cytosine (Cyt, C), hypoxanthine (Hyp, H) from adenine (Ade, A), and xanthine (Xan, X) and oxanine (Oxa, O) from guanine (Gua, G). Such damaged nucleobases may induce mutagenic problems, so that much attentions and efforts have been poured on the revealing of their mechanisms in vivo or in vitro. In this study, we employed these deaminated lesions as useful probes for analysis of DNA-binding/recognizing proteins or enzymes. Since the pyrimidine lesions such as Hyp, Oxa and Xan are employed as analogues of guanine, their comparative uses are informative for analyzing the role of Gua in DNA sequence in DNA-protein interaction. Several DNA oligomers containing such Hyp, Oxa or Xan substituted for Gua were designed to reveal the molecular interaction between DNA and protein. From this approach, we have got useful information to understand the molecular mechanisms of the DNA-recognizing enzymes, which have not ever been observed using conventional DNA oligomer composed of just natural nucleobases.
Abstract: This paper is mainly concerned with the application of
a novel technique of data interpretation for classifying measurements
of plasma columns in Tokamak reactors for nuclear fusion
applications. The proposed method exploits several concepts derived
from soft computing theory. In particular, Artificial Neural Networks
and Multi-Class Support Vector Machines have been exploited to
classify magnetic variables useful to determine shape and position of
the plasma with a reduced computational complexity. The proposed
technique is used to analyze simulated databases of plasma equilibria
based on ITER geometry configuration. As well as demonstrating the
successful recovery of scalar equilibrium parameters, we show that
the technique can yield practical advantages compared with earlier
methods.
Abstract: In the present study, a procedure was developed to
determine the optimum reaction rate constants in generalized
Arrhenius form and optimized through the Nelder-Mead method. For
this purpose, a comprehensive mathematical model of a fixed bed
reactor for dehydrogenation of heavy paraffins over Pt–Sn/Al2O3
catalyst was developed. Utilizing appropriate kinetic rate expressions
for the main dehydrogenation reaction as well as side reactions and
catalyst deactivation, a detailed model for the radial flow reactor was
obtained. The reactor model composed of a set of partial differential
equations (PDE), ordinary differential equations (ODE) as well as
algebraic equations all of which were solved numerically to
determine variations in components- concentrations in term of mole
percents as a function of time and reactor radius. It was demonstrated
that most significant variations observed at the entrance of the bed
and the initial olefin production obtained was rather high. The
aforementioned method utilized a direct-search optimization
algorithm along with the numerical solution of the governing
differential equations. The usefulness and validity of the method was
demonstrated by comparing the predicted values of the kinetic
constants using the proposed method with a series of experimental
values reported in the literature for different systems.
Abstract: With the proliferation of World Wide Web,
development of web-based technologies and the growth in web
content, the structure of a website becomes more complex and web
navigation becomes a critical issue to both web designers and users.
In this paper we define the content and web pages as two important
and influential factors in website navigation and paraphrase the
enhancement in the website navigation as making some useful
changes in the link structure of the website based on the
aforementioned factors. Then we suggest a new method for
proposing the changes using fuzzy approach to optimize the website
architecture. Applying the proposed method to a real case of Iranian
Civil Aviation Organization (CAO) website, we discuss the results of
the novel approach at the final section.
Abstract: Proxy signature helps the proxy signer to sign
messages on behalf of the original signer. It is very useful when
the original signer (e.g. the president of a company) is not
available to sign a specific document. If the original signer can
not forge valid proxy signatures through impersonating the proxy
signer, it will be robust in a virtual environment; thus the original
signer can not shift any illegal action initiated by herself to the
proxy signer. In this paper, we propose a new proxy signature
scheme. The new scheme can prevent the original signer from
impersonating the proxy signer to sign messages. The proposed
scheme is based on the regular ElGamal signature. In addition,
the fair privacy of the proxy signer is maintained. That means,
the privacy of the proxy signer is preserved; and the privacy can
be revealed when it is necessary.
Abstract: Previously, harmonic parameters (HPs) have been
selected as features extracted from EEG signals for automatic sleep
scoring. However, in previous studies, only one HP parameter was
used, which were directly extracted from the whole epoch of EEG
signal.
In this study, two different transformations were applied to extract
HPs from EEG signals: Hilbert-Huang transform (HHT) and wavelet
transform (WT). EEG signals are decomposed by the two
transformations; and features were extracted from different
components. Twelve parameters (four sets of HPs) were extracted.
Some of the parameters are highly diverse among different stages.
Afterward, HPs from two transformations were used to building a
rough sleep stages scoring model using the classifier SVM. The
performance of this model is about 78% using the features obtained by
our proposed extractions. Our results suggest that these features may
be useful for automatic sleep stages scoring.
Abstract: In this paper we investigate how wide-ranging
organizational support and the more specific form of support,
namely management support, may influence on tourism workers
satisfaction with a cash transaction system. The IS continuance
theory, proposed by Bhattacherjee in 2001, is utilized as a
theoretical framework. This implies that both perceived usefulness
and ease of use is included in the research model, in addition to
organizational and management support. The sample consists of
500 workers from 10 cruise and tourist ferries in Scandinavia that
use a cash transaction system to perform their work tasks. Using
structural equation modelling, results indicate that organizational
support and ease of use perceptions is critical for the users- level of
satisfaction with the cash transaction system.The findings have
implications for business managers and IS practitioners that want
to increase the quality of IT-based business processes within the
tourism industry.
Abstract: The present contribution deals with the
thermophoretic deposition of nanoparticles over a rapidly rotating
permeable disk in the presence of partial slip, magnetic field, thermal
radiation, thermal-diffusion, and diffusion-thermo effects. The
governing nonlinear partial differential equations such as continuity,
momentum, energy and concentration are transformed into nonlinear
ordinary differential equations using similarity analysis, and the
solutions are obtained through the very efficient computer algebra
software MATLAB. Graphical results for non-dimensional
concentration and temperature profiles including thermophoretic
deposition velocity and Stanton number (thermophoretic deposition
flux) in tabular forms are presented for a range of values of the
parameters characterizing the flow field. It is observed that slip
mechanism, thermal-diffusion, diffusion-thermo, magnetic field and
radiation significantly control the thermophoretic particles deposition
rate. The obtained results may be useful to many industrial and
engineering applications.