Abstract: This study proposes a basic molecular formula for all
proteins. A total of 10,739 proteins belonging to 9 different protein
groups classified on the basis of their functions were selected
randomly. They included enzymes, storage proteins, hormones,
signalling proteins, structural proteins, transport proteins,
immunoglobulins or antibodies, motor proteins and receptor proteins.
After obtaining the protein molecular formula using the ProtParam
tool, the H/C, N/C, O/C, and S/C ratios were determined for each
randomly selected sample. In this case, H, N, O, and S coefficients
were specified per carbon atom. Surprisingly, the results
demonstrated that H, N, O, and S coefficients for all 10,739 proteins
are similar and highly correlated. This study demonstrates that
despite differences in the structure and function, all known proteins
have a similar basic molecular formula CnH1.58 ± 0.015nN0.28 ± 0.005nO0.30
± 0.007nS0.01 ± 0.002n. The total correlation between all coefficients was
found to be 0.9999.
Abstract: Real-time hand tracking is a challenging task in many
computer vision applications such as gesture recognition. This paper
proposes a robust method for hand tracking in a complex environment
using Mean-shift analysis and Kalman filter in conjunction with 3D
depth map. The depth information solve the overlapping problem
between hands and face, which is obtained by passive stereo measuring
based on cross correlation and the known calibration data of
the cameras. Mean-shift analysis uses the gradient of Bhattacharyya
coefficient as a similarity function to derive the candidate of the hand
that is most similar to a given hand target model. And then, Kalman
filter is used to estimate the position of the hand target. The results
of hand tracking, tested on various video sequences, are robust to
changes in shape as well as partial occlusion.
Abstract: A state of the art Speaker Identification (SI) system
requires a robust feature extraction unit followed by a speaker
modeling scheme for generalized representation of these features.
Over the years, Mel-Frequency Cepstral Coefficients (MFCC)
modeled on the human auditory system has been used as a standard
acoustic feature set for speech related applications. On a recent
contribution by authors, it has been shown that the Inverted Mel-
Frequency Cepstral Coefficients (IMFCC) is useful feature set for
SI, which contains complementary information present in high
frequency region. This paper introduces the Gaussian shaped filter
(GF) while calculating MFCC and IMFCC in place of typical
triangular shaped bins. The objective is to introduce a higher
amount of correlation between subband outputs. The performances
of both MFCC & IMFCC improve with GF over conventional
triangular filter (TF) based implementation, individually as well as
in combination. With GMM as speaker modeling paradigm, the
performances of proposed GF based MFCC and IMFCC in
individual and fused mode have been verified in two standard
databases YOHO, (Microphone Speech) and POLYCOST
(Telephone Speech) each of which has more than 130 speakers.
Abstract: Six parameters, the effective diffusivity (De),
activation energy of De, pre-exponential factor of De, amount
(ASOW) of self-organized water species, and amplitude (α) of the
forced oscillation of the molecular mobility (1/tC) derived from the
forced cyclic temperature change operation, were characterized by
using six typical foods, squid, sardines, scallops, salmon, beef, and
pork, as a function of the correlation time (tC) of the water molecule-s
proton retained in the foods. Each of the six parameters was clearly
divided into the water species A1 and A2 at a specified value of tC
=10-8s (=CtC), indicating an anomalous change in the physicochemical
nature of the water species at the CtC. The forced oscillation of 1/tC
clearly demonstrated a characteristic mode depending on the food
shown as a three dimensional map associated with 1/tC, the amount of
self-organized water, and tC.
Abstract: Computed tomography and laminography are heavily investigated in a compressive sensing based image reconstruction framework to reduce the dose to the patients as well as to the radiosensitive devices such as multilayer microelectronic circuit boards. Nowadays researchers are actively working on optimizing the compressive sensing based iterative image reconstruction algorithm to obtain better quality images. However, the effects of the sampled data’s properties on reconstructed the image’s quality, particularly in an insufficient sampled data conditions have not been explored in computed laminography. In this paper, we investigated the effects of two data properties i.e. sampling density and data incoherence on the reconstructed image obtained by conventional computed laminography and a recently proposed method called spherical sinusoidal scanning scheme. We have found that in a compressive sensing based image reconstruction framework, the image quality mainly depends upon the data incoherence when the data is uniformly sampled.
Abstract: This paper describes the design and results of FROID,
an outbound intrusion detection system built with agent technology
and supported by an attacker-centric ontology. The prototype
features a misuse-based detection mechanism that identifies remote
attack tools in execution. Misuse signatures composed of attributes
selected through entropy analysis of outgoing traffic streams and
process runtime data are derived from execution variants of attack
programs. The core of the architecture is a mesh of self-contained
detection cells organized non-hierarchically that group agents in a
functional fashion. The experiments show performance gains when
the ontology is enabled as well as an increase in accuracy achieved
when correlation cells combine detection evidence received from
independent detection cells.
Abstract: Ultrasound is useful in demonstrating bone mineral
density of regenerating osseous tissue as well as structural alterations.
A proposed ultrasound method, which included ultrasonography and
acoustic parameters measurement, was employed to evaluate its
efficacy in monitoring the bone callus changes in a rabbit tibial
distraction osteogenesis (DO) model.
The findings demonstrated that ultrasonographic images depicted
characteristic changes of the bone callus, typical of histology findings,
during the distraction phase. Follow-up acoustic parameters
measurement of the bone callus, including speed of sound, reflection
and attenuation, showed significant linear changes over time during
the distraction phase. The acoustic parameters obtained during the
distraction phase also showed moderate to strong correlation with
consolidated bone callus density and micro-architecture measured by
micro-computed tomography at the end of the consolidation phase.
The results support the preferred use of ultrasound imaging in the
early monitoring of bone callus changes during DO treatment.
Abstract: In the context of channel coding, the Generalized Belief Propagation (GBP) is an iterative algorithm used to recover the transmission bits sent through a noisy channel. To ensure a reliable transmission, we apply a map on the bits, that is called a code. This code induces artificial correlations between the bits to send, and it can be modeled by a graph whose nodes are the bits and the edges are the correlations. This graph, called Tanner graph, is used for most of the decoding algorithms like Belief Propagation or Gallager-B. The GBP is based on a non unic transformation of the Tanner graph into a so called region-graph. A clear advantage of the GBP over the other algorithms is the freedom in the construction of this graph. In this article, we explain a particular construction for specific graph topologies that involves relevant performance of the GBP. Moreover, we investigate the behavior of the GBP considered as a dynamic system in order to understand the way it evolves in terms of the time and in terms of the noise power of the channel. To this end we make use of classical measures and we introduce a new measure called the hyperspheres method that enables to know the size of the attractors.
Abstract: In this paper, a two-dimensional mathematical model is developed for estimating the extent of inland inundation due to Indonesian tsunami of 2004 along the coastal belts of Peninsular Malaysia and Thailand. The model consists of the shallow water equations together with open and coastal boundary conditions. In order to route the water wave towards the land, the coastal boundary is treated as a time dependent moving boundary. For computation of tsunami inundation, the initial tsunami wave is generated in the deep ocean with the strength of the Indonesian tsunami of 2004. Several numerical experiments are carried out by changing the slope of the beach to examine the extent of inundation with slope. The simulated inundation is found to decrease with the increase of the slope of the orography. Correlation between inundation / recession and run-up are found to be directly proportional to each other.
Abstract: The main purpose of the research is to address the role of psychological harassment behaviors (mobbing) to which employees are exposed and personality characteristics over work alienation. Research population was composed of the employees of Provincial Special Administration. A survey with four sections was created to measure variables and reach out the basic goals of the research. Correlation and step-wise regression analyses were performed to investigate the separate and overall effects of sub-dimensions of psychological harassment behaviors and personality characteristic on work alienation of employees. Correlation analysis revealed significant but weak relationships between work alienation and psychological harassment and personality characteristics. Step-wise regression analysis revealed also significant relationships between work alienation variable and assault to personality, direct negative behaviors (sub dimensions of mobbing) and openness (sub-dimension of personality characteristics). Each variable was introduced into the model step by step to investigate the effects of significant variables in explaining the variations in work alienation. While the explanation ratio of the first model was 13%, the last model including three variables had an explanation ratio of 24%.
Abstract: The small interfering RNA (siRNA) alters the
regulatory role of mRNA during gene expression by translational
inhibition. Recent studies show that upregulation of mRNA because
serious diseases like cancer. So designing effective siRNA with good
knockdown effects plays an important role in gene silencing. Various
siRNA design tools had been developed earlier. In this work, we are
trying to analyze the existing good scoring second generation siRNA
predicting tools and to optimize the efficiency of siRNA prediction
by designing a computational model using Artificial Neural Network
and whole stacking energy (%G), which may help in gene silencing
and drug design in cancer therapy. Our model is trained and tested
against a large data set of siRNA sequences. Validation of our results
is done by finding correlation coefficient of experimental versus
observed inhibition efficacy of siRNA. We achieved a correlation
coefficient of 0.727 in our previous computational model and we
could improve the correlation coefficient up to 0.753 when the
threshold of whole tacking energy is greater than or equal to -32.5
kcal/mol.
Abstract: Land surface temperature (LST) is an important
parameter to study in urban climate. The understanding of the
influence of biophysical factors could improve the establishment of
modeling urban thermal landscape. It is well established that climate
hold a great influence on the urban landscape. However, it has been
recognize that climate has a low priority in urban planning process,
due to the complex nature of its influence. This study will focus on
the relatively cloud free Landsat Thematic Mapper image of the study
area, acquired on the 2nd March 2006. Correlation analyses were
conducted to identify the relationship of LST to the biophysical
factors; vegetation indices, impervious surface, and albedo to
investigate the variation of LST. We suggest that the results can be
considered by the stackholders during decision-making process to
create a cooler and comfortable environment in the urban landscape
for city dwellers.
Abstract: Battery storage system is emerging as an essential component of hybrid power system based on renewable energy resources such as solar and wind in order to make these sources dispatchable. Accurate modeling of battery storage system is ssential in order to ensure optimal planning of hybrid power systems incorporating battery storage. Majority of the system planning studies involving battery storage assume battery charging efficiency to be constant. However a strong correlation exists between battery charging efficiency and battery state of charge. In this work a Fuzzy logic based model has been presented for determining battery charging efficiency relative to a particular SOC. In order to demonstrate the efficacy of proposed approach, reliability evaluation studies are carried out for a hypothetical autonomous hybrid power system located in Jaisalmer, Rajasthan, India. The impact of considering battery charging efficiency as a function of state of charge is compared against the assumption of fixed battery charging efficiency for three different configurations comprising of wind-storage, solar-storage and wind-solar-storage.
Abstract: Many digital signal processing, techniques have been used to automatically distinguish protein coding regions (exons) from non-coding regions (introns) in DNA sequences. In this work, we have characterized these sequences according to their nonlinear dynamical features such as moment invariants, correlation dimension, and largest Lyapunov exponent estimates. We have applied our model to a number of real sequences encoded into a time series using EIIP sequence indicators. In order to discriminate between coding and non coding DNA regions, the phase space trajectory was first reconstructed for coding and non-coding regions. Nonlinear dynamical features are extracted from those regions and used to investigate a difference between them. Our results indicate that the nonlinear dynamical characteristics have yielded significant differences between coding (CR) and non-coding regions (NCR) in DNA sequences. Finally, the classifier is tested on real genes where coding and non-coding regions are well known.
Abstract: A low bit rate still image compression scheme by
compressing the indices of Vector Quantization (VQ) and generating
residual codebook is proposed. The indices of VQ are compressed by
exploiting correlation among image blocks, which reduces the bit per
index. A residual codebook similar to VQ codebook is generated that
represents the distortion produced in VQ. Using this residual
codebook the distortion in the reconstructed image is removed,
thereby increasing the image quality. Our scheme combines these two
methods. Experimental results on standard image Lena show that our
scheme can give a reconstructed image with a PSNR value of 31.6 db
at 0.396 bits per pixel. Our scheme is also faster than the existing VQ
variants.
Abstract: The most planted cover crops in the Czech Republic
are mustard (Sinapis alba) and phacelia (Phacelia tanacetifolia
Benth.). A field trial was executed to evaluate root system size (RSS)
in eight varieties of mustard and five varieties of phacelia on two
locations, in three BBCH phases and in two years. The relationship
between RSS and aboveground biomass was inquired. The root
system was assessed by measuring its electric capacity. Aboveground
mass and root samples to be evaluated by means of a digital image
analysis were recovered in the BBCH phase 70. The yield of
aboveground biomass of mustard was always statistically
significantly higher than that of phacelia. Mustard showed a
statistically significant negative correlation between root length
density (RLD) within 10 cm and aboveground biomass weight (r = -
0.46*). Phacelia featured a statistically significant correlation
between aboveground biomass production and nitrate nitrogen
content in soil (r=0.782**).
Abstract: The purpose of this study was to measure the maximal
isometric strength and to investigate the effects of different handleheights
and elbow angles with respect to Mid. sagittal plane on the
pushing and pulling strength in vertical direction. Eight male subjects
performed a series of static strength measurement for each subject.
The highest isometric strength was found in pulling at shoulder
height (S.H.) (Mean = 60.29 lb., SD = 16.78 lb.) and the lowest
isometric strength was found also in pulling at elbow height (E.H.)
(Mean = 33.06 lb., SD = 6.56 lb.). Although the isometric strengths
were higher at S.H than at E.H. for both activities, the maximal
isometric strengths were compared statistically. ANOVA was
performed. The results of the experiment revealed that there was a
significant different between handle heights. However, there were no
significant different between angles and activities, also no correlation
between grip strength and activities.
Abstract: Fractional Fourier Transform is a generalization of the
classical Fourier Transform. The Fractional Fourier span in general
depends on the amplitude and phase functions of the signal and varies
with the transform order. However, with the development of the
Fractional Fourier filter banks, it is advantageous in some cases to
have different transform orders for different filter banks to achieve
better decorrelation of the windowed and overlapped time signal. We
present an expression that is useful for finding the perturbation in the
Fractional Fourier span due to the erroneous transform order and the
possible variation in the window shape and length. The expression is
based on the dependency of the time-Fractional Fourier span
Uncertainty on the amplitude and phase function of the signal. We
also show with the help of the developed expression that the
perturbation of span has a varying degree of sensitivity for varying
degree of transform order and the window coefficients.
Abstract: This work investigated the phenology of Parah tree
(Elateriospermum tapos) using the General Purpose Atmosphere
Plant Soil Simulator (GAPS model) to determine the amount of Plant
Available Water (PAW) in the soil. We found the correlation
between PAW and the timing of budburst and flower burst at Khao
Nan National Park, Nakhon Si Thammarat, Thailand. PAW from the
GAPS model can be used as an indicator of soil water stress. The low
amount of PAW may lead to leaf shedding in Parah trees.
Abstract: Evaporator is an important and widely used heat
exchanger in air conditioning and refrigeration industries. Different
methods have been used by investigators to increase the heat transfer
rates in evaporators. One of the passive techniques to enhance heat
transfer coefficient is the application of microfin tubes. The
mechanism of heat transfer augmentation in microfin tubes is
dependent on the flow regime of two-phase flow. Therefore many
investigations of the flow patterns for in-tube evaporation have been
reported in literatures. The gravitational force, surface tension and
the vapor-liquid interfacial shear stress are known as three dominant
factors controlling the vapor and liquid distribution inside the tube. A
review of the existing literature reveals that the previous
investigations were concerned with the two-phase flow pattern for
flow boiling in horizontal tubes [12], [9]. Therefore, the objective of
the present investigation is to obtain information about the two-phase
flow patterns for evaporation of R-134a inside horizontal smooth and
microfin tubes. Also Investigation of heat transfer during flow
boiling of R-134a inside horizontal microfin and smooth tube have
been carried out experimentally The heat transfer coefficients for
annular flow in the smooth tube is shown to agree well with Gungor
and Winterton-s correlation [4]. All the flow patterns occurred in the
test can be divided into three dominant regimes, i.e., stratified-wavy
flow, wavy-annular flow and annular flow. Experimental data are
plotted in two kinds of flow maps, i.e., Weber number for the vapor
versus weber number for the liquid flow map and mass flux versus
vapor quality flow map. The transition from wavy-annular flow to
annular or stratified-wavy flow is identified in the flow maps.