Abstract: Segmentation, filtering out of measurement errors and
identification of breakpoints are integral parts of any analysis of
microarray data for the detection of copy number variation (CNV).
Existing algorithms designed for these tasks have had some successes
in the past, but they tend to be O(N2) in either computation time or
memory requirement, or both, and the rapid advance of microarray
resolution has practically rendered such algorithms useless. Here we
propose an algorithm, SAD, that is much faster and much less thirsty
for memory – O(N) in both computation time and memory requirement
-- and offers higher accuracy. The two key ingredients of SAD are the
fundamental assumption in statistics that measurement errors are
normally distributed and the mathematical relation that the product of
two Gaussians is another Gaussian (function). We have produced a
computer program for analyzing CNV based on SAD. In addition to
being fast and small it offers two important features: quantitative
statistics for predictions and, with only two user-decided parameters,
ease of use. Its speed shows little dependence on genomic profile.
Running on an average modern computer, it completes CNV analyses
for a 262 thousand-probe array in ~1 second and a 1.8 million-probe
array in 9 seconds
Abstract: Aluminum salt that is generally presents as a solid
phase in the water purification sludge (WPS) can be dissolved,
recovering a liquid phase, by adding strong acid to the sludge solution.
According to the reaction kinetics, when reactant is in the form of
small particles with a large specific surface area, or when the reaction
temperature is high, the quantity of dissolved aluminum salt or
reaction rate, respectively are high. Therefore, in this investigation,
water purification sludge (WPS) solution was treated with ultrasonic
waves to break down the sludge, and different acids (1 N HCl and 1 N
H2SO4) were used to acidify it. Acid dosages that yielded the solution
pH of less than two were used. The results thus obtained indicate that
the quantity of dissolved aluminum in H2SO4-acidified solution
exceeded that in HCl-acidified solution. Additionally, ultrasonic
treatment increased the rate of dissolution of aluminum and the
amount dissolved. The quantity of aluminum dissolved at 60℃ was 1.5
to 2.0 times higher than that at 25℃.
Abstract: The visualization of geographic information on mobile devices has become popular as the widespread use of mobile Internet. The mobility of these devices brings about much convenience to people-s life. By the add-on location-based services of the devices, people can have an access to timely information relevant to their tasks. However, visual analysis of geographic data on mobile devices presents several challenges due to the small display and restricted computing resources. These limitations on the screen size and resources may impair the usability aspects of the visualization applications. In this paper, a variable-scale visualization method is proposed to handle the challenge of small mobile display. By merging multiple scales of information into a single image, the viewer is able to focus on the interesting region, while having a good grasp of the surrounding context. This is essentially visualizing the map through a fisheye lens. However, the fisheye lens induces undesirable geometric distortion in the peripheral, which renders the information meaningless. The proposed solution is to apply map generalization that removes excessive information around the peripheral and an automatic smoothing process to correct the distortion while keeping the local topology consistent. The proposed method is applied on both artificial and real geographical data for evaluation.
Abstract: This study proposes a new recommender system based on the collaborative folksonomy. The purpose of the proposed system is to recommend Internet resources (such as books, articles, documents, pictures, audio and video) to users. The proposed method includes four steps: creating the user profile based on the tags, grouping the similar users into clusters using an agglomerative hierarchical clustering, finding similar resources based on the user-s past collections by using content-based filtering, and recommending similar items to the target user. This study examines the system-s performance for the dataset collected from “del.icio.us," which is a famous social bookmarking website. Experimental results show that the proposed tag-based collaborative and content-based filtering hybridized recommender system is promising and effectiveness in the folksonomy-based bookmarking website.
Abstract: Graph transformation has recently become more and
more popular as a general visual modeling language to formally state
the dynamic semantics of the designed models. Especially, it is a
very natural formalism for languages which basically are graph (e.g.
UML). Using this technique, we present a highly understandable yet
precise approach to formally model and analyze the behavioral
semantics of UML 2.0 Activity diagrams. In our proposal, AGG is
used to design Activities, then using our previous approach to model
checking graph transformation systems, designers can verify and
analyze designed Activity diagrams by checking the interesting
properties as combination of graph rules and LTL (Linear Temporal
Logic) formulas on the Activities.
Abstract: A simple and easy algorithm is presented for a fast calculation of kernel functions which required in fluid simulations using the Smoothed Particle Hydrodynamic (SPH) method. Present proposed algorithm improves the Linked-list algorithm and adopts the Pair-Wise Interaction technique, which are widely used for evaluating kernel functions in fluid simulations using the SPH method. The algorithm is easy to be implemented without any complexities in programming. Some benchmark examples are used to show the simulation time saved by using the proposed algorithm. Parametric studies on the number of divisions for sub-domains, smoothing length and total amount of particles are conducted to show the effectiveness of the present technique. A compact formulation is proposed for practical usage.
Abstract: The study is aimed to test causal relationship between
growth and unemployment, using time series data for Pakistan from
1972 to 2006. Growth is considered to be a pathway to decrease the
level of unemployment. Unemployment is a social and political
issue. It is a phenomenon where human resources are wasted leading
to deacceleration in growth. Johanson Cointegration shows that there
is long run relationship between growth and unemployment. For
short run dynamics and causality, the study utilizes Vector Error
Correction Model (VECM). The results of VECM indicate that there
is short and long run causal relation between growth and
unemployment including capital, labor and human capital as
explanatory variables.
Abstract: In online context, the design and implementation of
effective remote laboratories environment is highly challenging on
account of hardware and software needs. This paper presents the
remote laboratory software framework modified from ilab shared
architecture (ISA). The ISA is a framework which enables students to
remotely acccess and control experimental hardware using internet
infrastructure. The need for remote laboratories came after
experiencing problems imposed by traditional laboratories. Among
them are: the high cost of laboratory equipment, scarcity of space,
scarcity of technical personnel along with the restricted university
budget creates a significant bottleneck on building required
laboratory experiments. The solution to these problems is to build
web-accessible laboratories. Remote laboratories allow students and
educators to interact with real laboratory equipment located
anywhere in the world at anytime. Recently, many universities and
other educational institutions especially in third world countries rely
on simulations because they do not afford the experimental
equipment they require to their students. Remote laboratories enable
users to get real data from real-time hand-on experiments. To
implement many remote laboratories, the system architecture should
be flexible, understandable and easy to implement, so that different
laboratories with different hardware can be deployed easily. The
modifications were made to enable developers to add more
equipment in ISA framework and to attract the new developers to
develop many online laboratories.
Abstract: The article contains results of the flour and bread
quality assessment from the grains of spring spelt, also called as an
ancient wheat. Spelt was cultivated on heavy and medium soils
observing principles of organic farming. Based on flour and bread
laboratory studies, as well as laboratory baking, the technological
usefulness of studied flour has been determined. These results were
referred to the standard derived from common wheat cultivated in the
same conditions. Grain of spring spelt is a good raw material for
manufacturing bread flour, from which to get high-quality bakery
products, but this is strictly dependent on the variety of ancient
wheat.
Abstract: In this paper, we analyze the rotor eddy currents losses provoqued by the stator slot harmonics developed in the permanent magnets or pole pieces of synchronous machines. An analytical approach is presented to evaluate the effect of slot ripples on rotor field and losses calculation. This analysis is then tested on a model by 2D/3D finite element (FE) calculation. The results show a good agreement on loss calculations when skin effect is negligible and the magnet is considered.
Abstract: Tubular process equipment is often damaged in
industrial processes. The damage occurs both on devices working at
high temperatures and also on less exposed devices. In case of sudden
damage of key equipment a shutdown of the whole production unit
and resulting significant economic losses are imminent. This paper
presents a solution of several types of tubular process equipment. The
causes of damage and suggestions of correction actions are discussed
in all cases. Very important part is the analysis of operational
conditions, determination of unfavourable working states decreasing
lifetime of devices and suggestions of correction actions. Lately very
popular numerical methods are used for analysis of the equipment.
Abstract: The carbon based coils with the nanometer scale have
the 3 dimension helix geometry. We synthesized the carbon nano-coils
by the use of chemical vapor deposition technique with iron and tin as
the catalysts. The fabricated coils have the external diameter of
ranging few hundred nm to few thousand nm. The Scanning
Electro-Microscope (SEM) and Tunneling Electro-Microscope has
shown detail images of the coil-s structure. The fabrication of the
carbon nano-coils can be grown on the metal and non-metal substrates,
such as the stainless steel and silicon substrates. Besides growth on the
flat substrate; they also can be grown on the stainless steel wires. After
the synthesis of the coils, the mechanical and electro-mechanical
property is measured. The experimental results were reported.
Abstract: One of the essential components of much of DSP
application is noise cancellation. Changes in real time signals are
quite rapid and swift. In noise cancellation, a reference signal which
is an approximation of noise signal (that corrupts the original
information signal) is obtained and then subtracted from the noise
bearing signal to obtain a noise free signal. This approximation of
noise signal is obtained through adaptive filters which are self
adjusting. As the changes in real time signals are abrupt, this needs
adaptive algorithm that converges fast and is stable. Least mean
square (LMS) and normalized LMS (NLMS) are two widely used
algorithms because of their plainness in calculations and
implementation. But their convergence rates are small. Adaptive
averaging filters (AFA) are also used because they have high
convergence, but they are less stable. This paper provides the
comparative study of LMS and Normalized NLMS, AFA and new
enhanced average adaptive (Average NLMS-ANLMS) filters for noise
cancelling application using speech signals.
Abstract: The hidden-point bar method is useful in many
surveying applications. The method involves determining the
coordinates of a hidden point as a function of horizontal and vertical
angles measured to three fixed points on the bar. Using these
measurements, the procedure involves calculating the slant angles,
the distances from the station to the fixed points, the coordinates of
the fixed points, and then the coordinates of the hidden point. The
propagation of the measurement errors in this complex process has
not been fully investigated in the literature. This paper evaluates the
effect of the bar geometry on the position accuracy of the hidden
point which depends on the measurement errors of the horizontal and
vertical angles. The results are used to establish some guidelines
regarding the inclination angle of the bar and the location of the
observed points that provide the best accuracy.
Abstract: Due to the liberalization of countless electricity markets, load forecasting has become crucial to all public utilities for which electricity is a strategic variable. With the goal of contributing to the forecasting process inside public utilities, this paper addresses the issue of applying the Holt-Winters exponential smoothing technique and the time series analysis for forecasting the hourly electricity load curve of the Italian railways. The results of the analysis confirm the accuracy of the two models and therefore the relevance of forecasting inside public utilities.
Abstract: The usual correctness condition for a schedule of
concurrent database transactions is some form of serializability of
the transactions. For general forms, the problem of deciding whether
a schedule is serializable is NP-complete. In those cases other approaches
to proving correctness, using proof rules that allow the steps
of the proof of serializability to be guided manually, are desirable.
Such an approach is possible in the case of conflict serializability
which is proved algebraically by deriving serial schedules using
commutativity of non-conflicting operations. However, conflict serializability
can be an unnecessarily strong form of serializability restricting
concurrency and thereby reducing performance. In practice,
weaker, more general, forms of serializability for extended models of
transactions are used. Currently, there are no known methods using
proof rules for proving those general forms of serializability. In this
paper, we define serializability for an extended model of partitioned
transactions, which we show to be as expressive as serializability
for general partitioned transactions. An algebraic method for proving
general serializability is obtained by giving an initial-algebra specification
of serializable schedules of concurrent transactions in the
model. This demonstrates that it is possible to conduct algebraic
proofs of correctness of concurrent transactions in general cases.
Abstract: Soursop (Anona muricata) is one of the underutilized tropical fruits containing nutrients, particularly dietary fibre and antioxidant properties that are beneficial to human health. This objective of this study is to investigate the feasibility of matured soursop pulp flour (SPF) to be substituted with high-protein wheat flour in bread. Bread formulation was substituted with different levels of SPF (0%, 5%, 10% and 15%). The effect on physicochemical properties and sensory attributes were evaluated. Higher substitution level of SPF resulted in significantly higher (p
Abstract: This paper proposes a bi-objective model for the
facility location problem under a congestion system. The idea of the
model is motivated by applications of locating servers in bank
automated teller machines (ATMS), communication networks, and so
on. This model can be specifically considered for situations in which
fixed service facilities are congested by stochastic demand within
queueing framework. We formulate this model with two perspectives
simultaneously: (i) customers and (ii) service provider. The
objectives of the model are to minimize (i) the total expected
travelling and waiting time and (ii) the average facility idle-time.
This model represents a mixed-integer nonlinear programming
problem which belongs to the class of NP-hard problems. In addition,
to solve the model, two metaheuristic algorithms including nondominated
sorting genetic algorithms (NSGA-II) and non-dominated
ranking genetic algorithms (NRGA) are proposed. Besides, to
evaluate the performance of the two algorithms some numerical
examples are produced and analyzed with some metrics to determine
which algorithm works better.
Abstract: It is by reason of the unified measure of varieties of resources and the unified processing of the disposal of varieties of resources, that these closely related three of new basic models called the resources assembled node and the disposition integrated node as well as the intelligent organizing node are put forth in this paper; the three closely related quantities of integrative analytical mechanics including the disposal intensity and disposal- weighted intensity as well as the charge of resource charge are set; and then the resources assembled space and the disposition integrated space as well as the intelligent organizing space are put forth. The system of fundamental equations and model of complete factor synergetics is preliminarily approached for the general situation in this paper, to form the analytical base of complete factor synergetics. By the essential variables constituting this system of equations we should set twenty variables respectively with relation to the essential dynamical effect, external synergetic action and internal synergetic action of the system.
Abstract: Software maintenance is extremely important activity in software development life cycle. It involves a lot of human efforts, cost and time. Software maintenance may be further subdivided into different activities such as fault prediction, fault detection, fault prevention, fault correction etc. This topic has gained substantial attention due to sophisticated and complex applications, commercial hardware, clustered architecture and artificial intelligence. In this paper we surveyed the work done in the field of software maintenance. Software fault prediction has been studied in context of fault prone modules, self healing systems, developer information, maintenance models etc. Still a lot of things like modeling and weightage of impact of different kind of faults in the various types of software systems need to be explored in the field of fault severity.